Bremerella sp. P1: PSR63_04065
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Entry
PSR63_04065 CDS
T09589
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
brem
Bremerella sp. P1
Pathway
brem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
brem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSR63_04065 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
brem03021
]
PSR63_04065 (rho)
03019 Messenger RNA biogenesis [BR:
brem03019
]
PSR63_04065 (rho)
Transcription machinery [BR:
brem03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
PSR63_04065 (rho)
Messenger RNA biogenesis [BR:
brem03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PSR63_04065 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
OB_RNB
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
WDI45233
LinkDB
All DBs
Position
complement(972187..973446)
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AA seq
419 aa
AA seq
DB search
MHIAELQKMSMQDLIEEARKENLEDVSGSRRQDLIFRILKERVKMSGLMYGEGTLEILPD
GFGFLRSPDYHYLSCPDDIYVSPSQIRRFGLKTGNIVTGQIRPPKENERYFALLRVEAVN
YQDPNVAAQKVFFDDLTPLHPDDRIRMETTPDEYSGRIIDLIVPIGFGQRGLIVSPPRAG
KTIMMQNMAKAVLTNYPDAYCIMLLIDERPEEVTDMERQVKGPNCEVISSTFDEPPSRHV
QVAEMVIEKAKRMVEFGTDVVIFLDSITRLARAWNSECPPSGKLLSGGLDANALQRPKRF
LGSARKVEEGGSLTIIATALVDTGSRMDDVIFEEFKGTGNQEIVLDRRMVDRRIWPAIDI
NASGTRREEMLMDPEEYRRVCILRRVLNEMNPPDAMEFLLGHMSKNKTNAEFLMSMNVQ
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
gtgcatatcgccgaactgcagaagatgtcgatgcaggatctgatcgaagaggcccgcaag
gagaacctcgaggacgtttccggctcgcgccgccaggacctgatcttccgtatcctcaaa
gaacgcgtgaagatgtcgggcctgatgtacggcgaaggaacgctggaaatcctacccgat
ggcttcggcttcctgcgtagccccgactatcactatctgtcttgcccagacgatatctac
gtctctcctagccagatccgccgatttggcctgaagaccggtaacatcgtcaccggacag
atccgtccaccgaaggaaaacgagcgctacttcgcgctgttgcgtgtggaagcggtcaac
tatcaggacccgaacgtcgcagcccagaaggtcttcttcgacgacctcactccgctgcac
ccggacgatcggatccggatggagacgacccctgacgaatacagcggccgaatcatcgac
ttgatcgtgccgatcggtttcggtcagcgtggtctgattgtcagccctccgcgggccggt
aagacgatcatgatgcagaacatggccaaggcagttctgacgaactaccccgatgcctac
tgcatcatgctgctgatcgacgagcgtcctgaggaagtcaccgacatggagcggcaggtc
aaaggaccgaactgcgaagtgattagctcgaccttcgacgaaccgccgtcgcgtcacgtt
caagtggccgaaatggtcatcgaaaaggccaagcgaatggtcgaattcgggactgacgtg
gtcatcttcctcgactcgatcacgcgactggcacgggcctggaatagcgaatgcccccct
tcgggcaagctcctttccggtggtctggatgccaacgctctgcagcgtccgaagcgtttc
ctcggttcggcccgtaaggtcgaagagggtggctcgctgacgatcatcgccacggccctg
gtcgataccgggagccgtatggacgacgtgatcttcgaggaattcaaaggaaccggtaac
caggaaatcgtgctcgatcgccgtatggtcgatcgtcgcatctggccggccatcgacatc
aacgccagcggtacacgccgcgaagagatgctgatggatccggaagaataccgccgagtc
tgcatcctgcgtcgggttctcaacgaaatgaacccacccgacgcgatggagttcctgctc
ggtcacatgagcaagaacaagaccaacgctgagtttctcatgagcatgaatgtgcagtaa
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