Bremerella sp. P1: PSR63_04075
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Entry
PSR63_04075 CDS
T09589
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
brem
Bremerella sp. P1
Pathway
brem03030
DNA replication
brem03410
Base excision repair
brem03420
Nucleotide excision repair
brem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
brem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSR63_04075 (polA)
03410 Base excision repair
PSR63_04075 (polA)
03420 Nucleotide excision repair
PSR63_04075 (polA)
03440 Homologous recombination
PSR63_04075 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brem03032
]
PSR63_04075 (polA)
03400 DNA repair and recombination proteins [BR:
brem03400
]
PSR63_04075 (polA)
Enzymes [BR:
brem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSR63_04075 (polA)
DNA replication proteins [BR:
brem03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PSR63_04075 (polA)
DNA repair and recombination proteins [BR:
brem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PSR63_04075 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PSR63_04075 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
HHH_2
CorA
Motif
Other DBs
NCBI-ProteinID:
WDI43121
LinkDB
All DBs
Position
complement(974933..977788)
Genome browser
AA seq
951 aa
AA seq
DB search
MMKNRTRQTSLSFDTDETQEISEKIPQPTAAPADVGDPSDLKDKEVWIVDSHSLIFQVFH
AIPPMTGPAGQPVAAIYGFARDMVFLLEKKKPDYLICAFDLSGPTFRNELYDQYKANRDE
MPVELPSQIAGIRRLLEAMTIPVLEYEGFEADDVLAAAAKVVEEKGGRCTLVTTDKDCRQ
LITDNVRLFNVRKDAFYTAESLMEDWGVRPDQVVDFQAMVGDSVDNVPGIPLIGPKIAKD
LLNQFGTLEEVLDSVDKISGKKRKENITNGRELALVSKELVRLRDDVPLTWEWDKYVVTP
VNGQACEELCDEFGFRTLSKQLLSLSSGAAGQAETSALEATPLDYQAIETIDQLKELVEI
LRKQKRISIDTETTHTSPRWADLVGISVCWKPGTARYIPIQTPEEDPSLPLEEAIELLRP
VLEDENIKKLGQNLKYDEIVFRGVGIDLAGVDFDTMIAHYLLEAGARSHGLDELARRYLQ
HETVKISELIGTGKKQILMSQVPLEKVSYYACEDADIPLRLYEILGERLEEEGLTDLFDD
VEVPLIDVLVEMETNGIRVDTERLKNLSDAYGERLDGLEKEIYEIAEQPFNIASPKQLAE
ILFEKRNLPVIKKTKTGASTDAEVLEQLAKQDPLPQKIIDFRQYAKLKNTYIDALPNMIC
PKTNLVHTSFNQVVAATGRLSSNEPNLQNIPIRTKEGKEIRSAFKASREDWVLVCADYSQ
IELRVLAHYSKDEALREAYQNNQDIHAKVASEVYGIPLEEVTSNERRSAKAINFGIVYGQ
SAFGLAKSLDIEKDEAFGFIDAYFRKYPGVDDFMENTLQQCYKDGFVKTILGRRRKIDGV
RSPQKRDRMARQLLMPERTAVNTVIQGSAADIIKLAMIRVHKALSASDLQSKLLLQIHDE
LVFEAPPEEVPSLVKLMLPEMTEAVELDVPLVVDVESGQNWAECEPVDLDG
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaaatcgcacgcggcaaacgtcgctaagtttcgacacggacgagacgcaggaa
atttcggaaaaaattccccagcccacggctgctccggccgatgtcggcgatcccagcgat
ttgaaggacaaagaggtctggattgtcgactcgcactcgctgatcttccaggtcttccac
gcgatcccacccatgaccggtccggccggccagccggtggcggccatctatggcttcgcc
cgagatatggtcttcctgctggaaaagaagaagcctgactatttgatctgtgcgtttgac
ctctcggggccgaccttccgcaacgagctgtacgaccagtacaaagccaaccgcgacgaa
atgccagtcgaattgccttcgcagatcgccggcatccggcggctgttggaagcgatgacg
atcccggtgctcgagtacgaaggcttcgaggccgacgacgtcctggctgccgccgcgaaa
gtcgtggaagagaaggggggccgctgcaccctggtcaccaccgataaagactgccgccag
ctgatcaccgacaatgtgcggctgttcaatgtgcggaaggatgccttctacacggccgaa
tcattgatggaagactggggcgttcgtcccgaccaggttgtcgactttcaagcgatggtc
ggtgactcggtcgataacgtgccaggcattcccttgattggcccgaagatcgccaaggat
ctgctcaatcagtttggcaccttggaagaagtgctcgacagtgtcgataagatctccggc
aagaaacgcaaagagaacatcaccaatggccgcgaactggcgctggtcagcaaagagctg
gttcgcctccgcgatgatgtgccgctgacctgggagtgggacaagtacgtcgtcacgccg
gttaatggtcaggcatgtgaagagctgtgcgacgagtttggcttccgcacgctgtcgaaa
caacttctgtccctttcaagcggagcagcagggcaggcggagaccagcgcgctggaagca
acaccgctggactaccaggccatcgaaacgatcgatcagctgaaagaactggtcgagata
ctccgcaagcagaaacgcatctcgatcgataccgagaccacgcataccagccctcgctgg
gccgacctagttggtatctcggtttgctggaagcccggcaccgcgcggtacattccaatt
caaacaccggaagaagacccgagcctgccgctggaagaagcgatcgaactgcttcggcca
gtactcgaagacgaaaacatcaagaagctcggccagaacctgaagtacgacgagattgtc
tttcgcggtgtcggcatcgacctggccggcgtcgacttcgatacgatgatcgcccattac
ctgttggaagccggcgcacgatcgcacggcctggacgaactggcccgtcgctatttacag
cacgaaacggtcaagatcagcgagttgatcggcaccggcaagaagcagatcctgatgagc
caggtgccgctggaaaaggtctcgtactatgcctgtgaagacgcggacattccgctgcgg
ctgtacgagattctgggcgagcgactggaagaagaaggcctgaccgatctgttcgacgat
gttgaagtcccgctgatcgatgtcctggtcgagatggaaaccaacggcatccgcgtcgat
accgagcgtctcaagaacctgagcgacgcttacggcgagcgtctggacgggctcgaaaaa
gagatctacgagatcgccgagcagccgttcaacattgcctcgcccaaacagttggccgag
atcctgtttgagaaacgaaacctgccggtcatcaagaagaccaagaccggcgcatcaacc
gatgctgaagtgttggagcagttagccaagcaagatccgctgccgcagaagatcatcgac
ttccgccaatacgccaaactgaagaacacgtacatcgatgccctgccgaacatgatctgc
ccaaagaccaaccttgtgcacacgtcgttcaaccaggtggtggccgcgacagggcgactg
agttccaatgaaccgaacctgcagaacattccgatccgtaccaaggaagggaaagaaatt
cgttcggccttcaaagccagtcgcgaggactgggtgttggtctgtgccgactactcgcag
atcgaactgcgtgtactggcacattactctaaagacgaagctttgcgtgaggcgtatcaa
aacaatcaagacattcacgccaaggtcgcgtcggaggtgtatgggattccgctggaagag
gtgacctccaacgaacgccgcagcgcgaaggcgatcaactttggaatcgtctatggccaa
agcgcattcggcctggccaagagcctggatatcgagaaggacgaagcattcggctttatt
gatgcttacttccgcaaatacccaggcgtcgacgatttcatggagaacaccctgcagcag
tgctacaaggatggtttcgtgaaaacgattctgggtcgccgccgtaagatcgacggcgta
cgctctccgcagaagcgtgaccggatggcgcgtcagttactcatgcccgaacggaccgcg
gtaaatacggtcatccaaggttcggcggcggacattattaagctggccatgattcgcgtt
cacaaggcattgtcggcttccgacctgcagtcgaaacttctgcttcagattcacgacgaa
ctggtttttgaagcacccccggaagaagtgccatctttggtgaagttgatgctgccggaa
atgaccgaggcggtcgagttggatgttccgctggtggtcgatgtcgagtcggggcagaac
tgggccgagtgcgaaccggtcgatttagatggctga
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