KEGG   Bremerella sp. P1: PSR63_10360
Entry
PSR63_10360       CDS       T09589                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
brem  Bremerella sp. P1
Pathway
brem03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:brem00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PSR63_10360
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:brem03019]
    PSR63_10360
   03009 Ribosome biogenesis [BR:brem03009]
    PSR63_10360
Enzymes [BR:brem01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     PSR63_10360
Messenger RNA biogenesis [BR:brem03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     PSR63_10360
Ribosome biogenesis [BR:brem03009]
 Prokaryotic type
  rRNA helicases
   PSR63_10360
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 ERCC3_RAD25_C
Other DBs
NCBI-ProteinID: WDI44333
LinkDB
Position
complement(2513651..2514916)
AA seq 421 aa
MSTSEDSPEKKFTDLNLSEKMLAALKEARYEVPSPIQAGVIPLALEGKDVLGQARTGTGK
TAAFGIPIIETLPSGKGPHALILVPTRELAVQVRDEIVKLSKGMSIQTVAIYGGKPIKGQ
MDKLKRNPDIVVGTPGRVIDHMTRRSLSLDYLSMVVLDEADRMLDIGFRPDIEKILRRCP
EQRQTMLLSATVPPPIERLAKRYMHEPVKVDFSPKNISADTIEQHYFTVDGPKKMELLVR
LLRREQPTKCIVFCRTKRGTEKLFQRLQKKTKLVRCIHGDMQQGARNRTITDFKANKYRI
LIATDVVGRGIDISDVTLIVNYDVPEYSDDYVHRVGRTGRMGKEGVAYTFVTPEEGNQLT
RIEMRIDKLLIRDEIEGFDPYVKTSVQTTPPHARDTDNAGKEEEKKEPPKKAPRRRHRRA
L
NT seq 1266 nt   +upstreamnt  +downstreamnt
ttgtcgacctctgaagattccccagaaaagaagttcaccgatctcaatctctccgaaaag
atgctcgcggccctgaaagaggcccgctatgaggtcccctcgccgattcaagctggcgtc
attcccttggccctggaagggaaagatgtcctcggtcaggcccgcaccggtaccggcaag
acggccgcgttcggcattccgatcatcgagacgcttccttctggcaaaggtccccacgcc
ctgatcctggtgccgacccgcgagttggccgttcaggtccgcgacgagatcgtgaagctc
tcgaaaggaatgagcattcagacggtcgccatctatggtggtaagcccatcaaagggcag
atggataagctcaagcgaaaccccgacatcgttgttgggacgcctggtcgcgtgatcgat
cacatgacacgccggtccctttcgctcgactacctgagcatggtcgtgctggacgaagcc
gaccggatgctcgatatcggttttcgtcccgacatcgagaagatcttgcgtcgctgtccg
gaacaacgccagacgatgctgctgagcgccaccgttcctccgccgatcgaacgcctggcc
aaacgctacatgcacgagccggtgaaggtcgacttctctcctaagaacatctcggccgac
acgatcgagcagcattacttcacggtcgacggaccgaagaagatggagctgctggttcgc
ctgcttcgccgcgagcagcccaccaagtgcattgttttctgccgcaccaagcgaggcacc
gaaaagctgttccagcgactgcagaagaagaccaagctggtccgctgcatccacggcgac
atgcagcagggagcccgcaaccgtacgatcactgatttcaaagcgaacaagtatcgcatt
ctgatcgccaccgacgtcgtgggccgcgggatcgatatctcggatgtgacgctgatcgtg
aactacgacgtgccggaatactccgacgactacgtccaccgcgtgggccgtaccggccgc
atgggcaaggaaggggtcgcgtacaccttcgtgacgccggaagaaggtaatcagctgacg
cggatcgagatgcggatcgacaagctgctgattcgcgacgagatcgaaggcttcgacccg
tacgtcaagacatcagtgcagaccactccgccgcacgctcgcgataccgacaacgcaggc
aaagaagaagaaaagaaagagccgcccaagaaggctccccgtcgccgtcaccgccgggca
ctctag

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