Bremerella sp. P1: PSR63_12430
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Entry
PSR63_12430 CDS
T09589
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
brem
Bremerella sp. P1
Pathway
brem03030
DNA replication
brem03430
Mismatch repair
brem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
brem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSR63_12430 (dnaE)
03430 Mismatch repair
PSR63_12430 (dnaE)
03440 Homologous recombination
PSR63_12430 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brem03032
]
PSR63_12430 (dnaE)
03400 DNA repair and recombination proteins [BR:
brem03400
]
PSR63_12430 (dnaE)
Enzymes [BR:
brem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSR63_12430 (dnaE)
DNA replication proteins [BR:
brem03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PSR63_12430 (dnaE)
DNA repair and recombination proteins [BR:
brem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PSR63_12430 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
WDI44743
LinkDB
All DBs
Position
complement(2974144..2977683)
Genome browser
AA seq
1179 aa
AA seq
DB search
MSQSFVHLHCHSHYSLLDGAGPIPKLVTRAKEHGMNALALTDHGNLHGALQFYNTCKANE
INPIIGYEAYIAPGSRLEKSGGMRGSNYHLTLLAKNKTGFKNLVKLASAAYLEGFYFKPR
IDKELLEKFHEGIICLSGCVSSEFSKIVMNGTNTAEVVKEAEETAGWFHNLFGDRYFIEI
MNNGLDIQKMQLDGAVDIAKKIGLPLVATSDTHYVDQSDAEAQDILLCVNTGKFRTDASR
MKMENDQFYLRSPDDMYASFPGLEDACSRSQEIADTVDIDLELGKRHFPSFKIPDGKTAD
DYLRELCIQGLKERYEGNEEMAPGGELSEVVMTRLDRELGVISRLGFPNYFLIVWDFVVE
ARKQNIPATARGSGVGAIVCYALYMSHVCPIKYDLLFERFLDENRLEAPDIDIDFDKERR
GMVIKYVKDKYGEANVAQIGTFGTLAARAAIKDVGRAMGLPLDMVNEVTGMVPDQLGIKL
KDALAQSADMQSAYNANPDIKELLDLAMKIEGLARNVGTHAAAVVIADEPLEEYVPLCRV
SGKDDIITQWSMNDVEAAGLLKMDFLGLRNLTILRNAIDLIKKVRGEDLDILRLPLDDKD
TFDLLRRGETKGVFQLESGGIRDLLKRMKPDSFLDIIATNALYRPGPLEGGMVDDYIEVK
HGRKEAAYKHQVLKDVLEETNGVMVYQEQVMRILNRLGGIPLAKAYTCIKAISKKKESII
QANREQFLEGAQEKGLTKQEAQDFWDMIVKFAGYGFNKSHSTAYALVAYQTAYLKSHYPI
EFMAALLSGDISGRNFKTKDALVEHMEDAERMNIEVAPPDVNNSDEEFTVKDGKIVFALS
AIKGCGGGAAEAIVAAREKDGPFTDIFDFCERVDPSQCSKGAIETLIKAGAFDRLGGHRA
QYVTALDKAIQSGASAIADKKAGQKNLFAAVEDPAEDAKAVVLPDVQPWPDKETLGYEKE
CLGFYWSSHPLAEYKRKFEMCCSHSTANLAGVKDKTEVTMGGMVASIKLAHTRKARAGST
HTKYANFDLEDVDGGIRCILWPEDYAKVGESLRPDGVYIISGRLDRRGGDDEANLIVNEL
IPIEEVETRYARGVMVRIDQQVHGEEKLQTLVEIVRGYPGNCELKLLLVLEDGRQVALKS
QKGVDLSPEMRTRVDELLGEGNFELLLRRPASGGVRNSA
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgagccagtcgttcgtccatttgcattgccattcgcactacagtcttttggacggagcg
ggtccgattcccaagctcgtgacgcgtgccaaagaacacggcatgaacgcgctggctttg
accgatcacggtaacctgcacggggcgctgcagttctacaacacgtgcaaagccaacgag
atcaatccgatcattggctacgaggcctacatcgccccaggcagccgtctggaaaaatcg
ggcggtatgcgcggctcgaactatcacctgacgctgctggccaaaaacaagacgggcttc
aagaacctggtgaagctggcatcggccgcctacctggaaggcttctacttcaaaccgcgt
atcgataaagaactgttagagaaattccacgaagggatcatctgcctgagtggttgcgtg
agcagcgagttctcgaagattgtcatgaacgggaccaatacggccgaggtcgtcaaggaa
gccgaggagacggctggctggttccataatctgttcggcgatcgctacttcattgagatc
atgaacaatggtctcgacattcagaagatgcagctcgatggcgcggtcgacatcgccaag
aagatcggccttcccctcgtcgcgaccagcgacacgcactatgtcgatcaaagtgatgca
gaagcccaggacatcttgctctgcgtgaacaccggcaagttccgcacggatgcctcgcgg
atgaagatggagaacgatcagttctatcttcgtagtccggacgacatgtacgccagcttc
cctgggctggaagatgcctgttcgcgtagccaggaaatcgccgacaccgtcgatatcgac
ctggaactgggcaagcgtcacttcccatcgttcaagattcccgatggcaagacggccgac
gattacctccgcgagctctgcattcagggtctcaaagaacggtacgaaggcaacgaggaa
atggcgcccggcggagaattgagcgaagtcgtgatgactcgcctagaccgcgaactgggc
gtgatcagccggctcggctttccgaactacttcttgatcgtgtgggactttgttgtcgag
gcccgcaagcaaaacattccggccacggctcgtggtagcggtgtgggcgcgattgtgtgc
tatgccctgtacatgagccacgtctgtccgatcaagtacgacttgctgttcgaacgattc
ctggatgaaaaccgtttggaagcccctgatatcgatatcgacttcgataaagaacgtcgg
ggaatggtcatcaagtatgtgaaggacaagtacggcgaggcgaatgttgcccagattggc
acgttcggtacgcttgccgcccgggcagcaatcaaggacgttggccgtgcgatgggtctg
ccactggatatggtcaatgaagtgaccggcatggtacctgatcaattaggtatcaagctc
aaggatgcgctcgcccaaagcgcggacatgcagtccgcctacaacgcaaaccccgacatc
aaagagctgctcgatctggcgatgaagatcgaagggctggcacgaaacgtcggtacgcac
gcggccgccgtggtgatcgccgacgagccgttggaggaatacgttcccctttgccgcgtt
tccggcaaggacgacatcatcacccagtggtcgatgaatgacgttgaagcggccggtctt
ctgaagatggacttccttggtctgcgcaacttgacgatcctgcgaaacgcgatcgatctg
atcaagaaggttcgtggcgaagacctcgatatcctgcggcttccgctcgacgacaaggac
accttcgaccttttgcggcgcggcgaaacgaagggtgtgttccagctggaaagtggtggt
attcgcgatctattaaagcgaatgaagccggacagcttcctcgatattatcgcgacgaat
gcactctaccgtcctggtccactcgaaggcgggatggtcgatgactatatcgaggtgaag
cacggtcggaaggaagcggcctacaagcaccaagtgctgaaagacgtgctggaagagacc
aacggtgtgatggtctaccaggaacaggtgatgcggatcctgaaccgcctgggcggtatt
ccgctggccaaagcgtacacatgtattaaggcgatcagtaaaaagaaagaatcgatcatc
caggccaaccgcgaacagttcctggaaggtgctcaagagaaaggcctcaccaagcaagaa
gcccaggacttctgggacatgatcgtcaagttcgccgggtacggcttcaataagagccac
tcgaccgcctacgcgctggttgcctatcaaacggcctatctcaaatcgcactacccgatc
gagttcatggccgcgcttctttccggtgacatcagtggtcgtaacttcaagacgaaggat
gccctggtcgagcacatggaagacgccgagcggatgaacatcgaagttgctccgccagac
gtcaacaactcggacgaagagttcacggtgaaggatggcaagatcgttttcgctttgagc
gcgatcaaaggttgcggtggtggcgcggccgaagcgatcgtcgcggctcgcgaaaaggac
gggcctttcaccgacatcttcgatttctgcgaacgggtcgatccctcgcagtgcagcaaa
ggtgccatcgaaaccttgatcaaggctggcgcgttcgatcgcctcggcgggcatcgggct
cagtatgttacggcattggacaaggccatccagtcgggtgcctcggcaatcgccgacaag
aaggcaggccagaagaacctcttcgccgccgtcgaagatcctgcagaagacgcgaaagcg
gtggtgcttcccgacgtacaaccttggccggacaaagaaacactcggctacgagaaagag
tgccttgggttctattggtcgagccatcccctagccgagtacaaacgcaagttcgagatg
tgctgcagccacagtaccgcgaatctggccggcgttaaagacaagaccgaagtcaccatg
ggcggcatggtcgcttcgatcaagctcgcccacacgcggaaggcccgtgctggaagcacg
cataccaagtacgccaacttcgacctggaagatgtcgatggcggcatccgctgtatccta
tggccggaagactatgccaaggtcggagagtccctcaggccagacggcgtttacatcatc
tccgggcgactcgatcgacgaggtggcgacgacgaagctaacttgatcgtcaacgaattg
atccccatcgaagaagtagaaacgcggtatgcacgcggcgtgatggttcgaatcgaccag
caagtccatggtgaagagaaactccaaacgcttgttgaaatcgtgcgtggttaccccggc
aactgcgaactgaagcttctgctggtgctcgaggacggtcgtcaggttgccctgaaaagc
caaaagggggtcgacctttcgccggaaatgcggacgcgtgtcgatgaacttctcggggaa
ggcaacttcgagcttctcctgagacgccctgcttctggaggggtccgcaattcggcatag
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