Bremerella sp. P1: PSR63_27310
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Entry
PSR63_27310 CDS
T09589
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
brem
Bremerella sp. P1
Pathway
brem02020
Two-component system
brem02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
brem00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSR63_27310 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PSR63_27310 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
brem03021
]
PSR63_27310 (rpoN)
Transcription machinery [BR:
brem03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PSR63_27310 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_Crp_2
LacI
HTH_23
HTH_Tnp_ISL3
DUF1542
MarR
HTH_21
Baculo_VP39
Motif
Other DBs
NCBI-ProteinID:
WDI42164
LinkDB
All DBs
Position
6747108..6748586
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AA seq
492 aa
AA seq
DB search
MRMSFGLEQKMVQKQVLAPRMIQSMEILQLPVLALQEKIEQEMNENPMLEVQEQEASDSE
DTSKDEYDSRSESEEEFVVEDGKDNADDFERLLEMDQQYPDTFDERPQRSSGQMEEDAER
RMDALANVQSRPETLQDHLDHQLYELTIEPLVREWAERIISALDSNGYLTTSLEDLLPAD
ADDELKDTAQEALHVVQSLDPAGVGARDLRECLLLQIDPSRMFYDELRTLIMNHLEDLRD
NRLPQIQKATGFSIERIQAAWSELRRLDPKPGSIYNDSHVANVIPDLMLDVDEDGRYVVQ
AEDRDIPQLRISNYYRERLSSPTATREEKEFIKRKLNAAQWLIDAIIQRQNTLSRVAQAI
VDYQKDFIDNGPEHITPLKMQQIADQVGVHVTTVSRAVDDKYIQTPRGIFPLKAFFAGGT
VNEAGEEVTWDQIRLRLQEVIDNEDKAKPLSDDDLVKKLKDDGLNVARRTVTKYRKKMGI
PSSRQRRDWSKK
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgagaatgtccttcggtctcgagcagaagatggtccagaagcaagttctggccccacgg
atgattcaatccatggaaattctgcaactgcccgttcttgctctgcaagagaagatcgag
caggaaatgaacgaaaacccgatgctcgaagttcaggaacaagaagcgagcgattcggaa
gatacctccaaagacgaatacgattcacgctccgagtccgaagaagaattcgtcgtcgaa
gacggcaaggacaatgccgacgacttcgaacgccttctggaaatggaccagcagtatccc
gacaccttcgacgaacgcccgcaacgttcttccggccaaatggaagaagacgccgagcgc
cgcatggacgcgttggccaacgttcaatctcgaccggaaacgctgcaagatcatctcgat
catcaactgtacgaactcaccatcgaaccgctggttcgcgaatgggccgaacgcattatc
tcggctctcgatagcaacggttacctaaccacgagcctcgaagacttgctcccggccgat
gccgacgacgaactaaaggacaccgctcaggaagccctgcacgtcgttcaatcgctcgac
ccagccggtgttggtgcgcgtgacctgcgcgaatgcctgctcctgcaaatcgatccgtcg
cggatgttctacgacgaacttcgcacgctgataatgaaccacctggaagaccttcgtgac
aatcgtctgccacaaattcaaaaggcaaccggcttctcgatcgaacgcattcaggctgcc
tggagcgaactacgccgcttagacccgaagccaggctcgatctacaacgactcgcatgtc
gccaatgtcatccctgacctgatgctcgacgtcgacgaggatggccgctacgtcgtgcag
gccgaagaccgtgacattcctcagctgcggatcagcaactactatcgtgaacgtctttcc
agccccacggcgacgcgggaagagaaagagttcatcaagcgaaagctgaacgccgcccag
tggctgatcgacgcgatcatccagcgtcaaaacacgctcagccgcgttgcccaggcaatc
gtcgactatcaaaaggacttcatcgacaacggccccgagcacatcacgccgctcaagatg
cagcagatcgctgaccaggttggcgtgcacgtgacgaccgttagccgagctgtcgacgac
aagtacattcagaccccgcgcggtatcttcccgctcaaagccttcttcgccggtggtacg
gtgaacgaagctggcgaggaagttacctgggatcagattcgtctgcgtctacaggaagtg
atcgacaacgaagacaaagccaaaccgctgtcggacgacgacctggtcaagaagctcaaa
gacgacggcctcaacgttgcccgccgtacggtcaccaagtaccgcaagaaaatgggcatc
cccagctcgcgtcaacgacgtgactggtcgaagaagtaa
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