Brevundimonas sp. NIBR11: KKHFBJBL_00031
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Entry
KKHFBJBL_00031 CDS
T10976
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bren Brevundimonas sp. NIBR11
Pathway
bren03030
DNA replication
bren03430
Mismatch repair
bren03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bren00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KKHFBJBL_00031
03430 Mismatch repair
KKHFBJBL_00031
03440 Homologous recombination
KKHFBJBL_00031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bren03032
]
KKHFBJBL_00031
03400 DNA repair and recombination proteins [BR:
bren03400
]
KKHFBJBL_00031
Enzymes [BR:
bren01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KKHFBJBL_00031
DNA replication proteins [BR:
bren03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KKHFBJBL_00031
DNA repair and recombination proteins [BR:
bren03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KKHFBJBL_00031
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
AAA_5
AAA_16
AAA_30
RuvB_N
AAA_14
AAA_19
AAA_18
DUF815
TsaE
AAA_assoc_2
SRP54
Mg_chelatase
AAA_24
nSTAND3
RsmA_N
AAA_2
AAA_lid_RFC1
RCF1-5-like_lid
DUF3117
AAA_28
ResIII
Sigma54_activ_2
AAA_33
CbiA
VapE-like_dom
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
WGM29829
LinkDB
All DBs
Position
34469..36295
Genome browser
AA seq
608 aa
AA seq
DB search
MTDVDLDSGDPPWAEDDAPERDENTDDMFGAPVPAPAAAVVKESIPISTPAPVEGEGEAY
TVLARKYRPRIFEDLIGQEAMVRTLTNAFATGRIAHAFMLTGVRGVGKTTTARLLARALN
NETDVIDRPSLELTAHGRHDAAIMAGQHMDVMEMDAASHTGVNDIRDILESVRYAPVEAR
YKVYVLDEVHMLSNQAFNALLKTLEEPPPHAKFIFATTEIRKVPVTILSRCQRFDLRRVE
PEILVEHLGRIATKEGMKVEDDALALIARAAEGSVRDGLSLLDQALVQGEKGEPVATDTV
RDMLGLADRSQTIALFEQIMAGRTPEAIETFRTLYGYGADPVQVTNDLLEHCHAASVAKM
LGPNATRLPNDQAQRLAAMGSAVSAGTLSRTWSMLLKALDEVRRAPSPADAVEMAIVRLA
YAADLPGPEEALKKLQNGEPLGGGAGGPRGGGGGGGASAQLSVRPAPIPTLPDPQSFEDV
VSLVGQKREIALQMEIERYVRPVSFAPGRLTFEPVAGMPANLATKLASRLKEWTGRQWFV
IANGEGGGETVIELNRRETAQVRAEVEADPFVKAVLEAFPGAVVGEIKTIAPSVEMPAIP
DEIEDDAD
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgtcgaccttgattccggcgatccgccctgggcggaagacgatgcgcccgag
cgtgacgagaacaccgacgacatgttcggtgcccccgtgcctgcgcccgccgcagcggtc
gtgaaggagtccatccccatttccacgcccgctcccgtcgagggcgaaggcgaggcctac
accgtcctcgcccgcaaataccggcccaggatcttcgaggacctgatcggtcaggaggcc
atggtccgaaccctgacgaacgcctttgccaccggccgcatcgcccacgctttcatgctg
accggggtgcggggggtcggtaagaccacgacagcccgcctgctggcccgcgccctgaac
aacgagaccgacgtcatcgaccggccttcgctggagttgaccgcccacggccgccatgac
gcggccatcatggcgggtcagcacatggacgtcatggagatggacgccgcctcccacacc
ggcgtcaacgacatccgcgatatcctcgaaagcgtccgctacgcgccggtcgaggcccgc
tacaaggtctacgtcctcgacgaagtccacatgctgtcgaaccaggccttcaacgccctg
ctgaagacgctggaagagccgccgccccacgccaaattcatcttcgccaccaccgagatc
cgcaaggtgccggtgacgatcctcagccgctgccagcggttcgacctgcgccgcgtagag
ccggaaatcctggtcgagcacctcggacgcatcgccacgaaggaaggcatgaaggtcgag
gacgacgcgctcgccctcatcgcccgcgccgccgagggctcggtccgcgacggtctgtcc
ctgctggatcaggccctggtccagggcgagaagggcgagccggtcgcgaccgacaccgtc
cgcgacatgctgggcctcgccgatcgttcccagaccatcgccctgttcgaacagatcatg
gctggtcgcacgcccgaggcgatcgaaaccttccgcaccctctacggctacggcgccgat
ccggttcaggtgaccaacgacctgctggaacactgccacgccgcctcggtcgccaagatg
ctgggtccgaacgcgacccgcctgcccaacgatcaggcccagaggctggcggccatgggt
tccgcggtctcggcgggaaccctgtcgcgaacctggtccatgctgctgaaggcgctggac
gaggtccgccgcgcgccctcgccagccgatgccgtcgaaatggccatcgtccgcctcgcc
tacgccgccgacctgcccggtccggaagaggcgctgaagaagctgcagaacggcgaaccg
ctgggcggcggcgcgggcggcccacgcggcggcgggggaggcggcggcgcctcggcccag
ctttcggttcgccccgcgcccatcccgaccctgcccgatccgcagtcgttcgaggacgtc
gtgtccttggtcggtcagaagcgcgagatcgcccttcagatggagatcgagcgctacgtc
cgccccgtctccttcgcgcccggccgtctgaccttcgagccggtcgccggcatgcccgcc
aatctggcgacgaagctggcctcgcggctcaaggaatggaccggacgtcagtggttcgtc
atcgccaacggcgagggcggcggcgagacggtcatcgagctcaatcgtcgcgagaccgcc
caggtccgcgcagaggtcgaggccgaccctttcgtcaaggcggtgctggaggccttcccc
ggcgccgtcgtcggcgagatcaagaccatcgccccctcggtcgagatgcccgccatcccg
gatgagatcgaggacgacgcggactaa
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