Brevundimonas sp. NIBR11: KKHFBJBL_00226
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Entry
KKHFBJBL_00226 CDS
T10976
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
bren Brevundimonas sp. NIBR11
Pathway
bren03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bren00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KKHFBJBL_00226 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bren03400
]
KKHFBJBL_00226 (uvrB)
DNA repair and recombination proteins [BR:
bren03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KKHFBJBL_00226 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KKHFBJBL_00226 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
UB2H
Kinesin
DUF2963
Microtub_bd
SWI2_SNF2
DUF87
ACP_syn_III_C
Motif
Other DBs
NCBI-ProteinID:
WGM30011
LinkDB
All DBs
Position
complement(232810..235167)
Genome browser
AA seq
785 aa
AA seq
DB search
MNRSSTPKGSAPVIKKPVHIPNQGVAEAPSAFLRDDNAPLPKAMANMPMFAPVTGPRLTP
EEAPGKPDDWVPHRPSHDGKKKSGKFRLETSYTPAGDQPAAIAELVAQAEAGDRDQVLLG
VTGSGKTFTMAKVIEQTQRPALILAPNKTLAAQLYSEFKSFFPDNAVEYFVSYYDYYQPE
AYVPRTDTYIEKDSSINEQIDRMRHSATRSILERDDVIVIASVSCIYGIGSVETYTAMTF
DLKVGDQIDEGKLRADLIALQYKRNDAAFERGMFRKRGDTVEIFPVHQEDRAWRVSLFGD
EIESIQEFDPLTGKKTNDLKEITVYAASHYVTPRPTLNQALHGIRAELKETLDWMVENGK
LLEAQRLEQRVRFDLEMMEATGSCAGIENYSRWLTGRAPGEPPPTFFEYIPDNALLFVDE
SHVTIGQINGMFRGDYRRKSTLAEYGFRLPSCIDNRPLKFDEWEAMRPQTIHVSATPQTW
EMEQAGGVFVEQVIRPTGLIDPPVEIRPVSGTTRNQVDDVIDEVKQTARNGYRSLVTVLT
KKMAEDLTEYMHEQGVRVRYMHSDVDTMERIEIIRDLRLGTFDVLIGINLLREGLDIPEC
GLVAILDADKEGFLRSETSLIQTIGRAARNVDGRVILYADRMTGSMERAIAETNRRRERQ
EAYNAEHGITPESVKRDIKEILDSPYEKDRVLIPTGVKEESRPFIGNNFQAALRDMEAKM
REAASNLEFEEAGRLRDEIKRLKLLDLEFANEVLTGDGQDVDASAPKRWRKEAQAEAQER
FRKGR
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgttcctccacgccgaagggctcggcccccgtcatcaagaagccggtccacatt
cccaaccagggggtggcggaggccccgtccgccttcctgcgcgacgataacgcccccctg
cccaaggccatggcgaacatgcccatgttcgcccccgtcaccggcccgcgcctgacgcct
gaggaggcccccggcaagcccgacgactgggtcccgcaccgcccgtcgcacgacggcaag
aagaagagcggcaagttccggctggagaccagctacacccccgccggcgaccagcccgcc
gccatcgccgaactggtcgcccaggccgaggccggcgacagggaccaggttctgctgggc
gtcaccggctcgggcaagaccttcaccatggccaaggtcatcgaacagacccagcggccc
gcacttatacttgccccaaacaaaacactagcggcgcaactatactccgaatttaaatcg
ttctttcccgataatgcggtcgaatacttcgtaagctactatgattactaccagcctgaa
gcatacgttcctagaactgatacatatatagagaaggactccagcataaacgagcagatc
gaccggatgcggcattcggcgacgcggtcgattctggagcgggacgatgtgatcgtgatc
gcgtcggtcagctgcatctacggcatcgggtcggtggagacctatacggcgatgaccttc
gacctgaaggtcggggaccagatcgatgagggcaaactcagggccgatctgatcgcgctg
cagtacaagcggaacgatgcggcgttcgagcggggcatgttccggaagcgcggcgacacg
gtcgaaatcttccccgtgcaccaagaggaccgggcctggcgcgtcagcctgttcggcgac
gagatcgagtccatccaggagttcgaccccctcaccggcaagaagacgaacgatctgaag
gagatcaccgtctacgccgcctcccactacgtcacgccccggccgacgctgaaccaggcc
ctccacggcatccgcgccgagctcaaggagacgctcgactggatggtcgagaacggcaag
ctgctggaggcccagcggctggagcaacgcgtccgcttcgacctggagatgatggaggcg
accggctcctgcgccgggatcgagaactattcccgctggctgaccggccgcgcgccgggc
gagccgccgccgaccttcttcgaatacatccccgacaacgccctgctgttcgtggacgag
agccacgtcaccatcggccagatcaacggcatgttccggggcgactaccgccgcaagtcg
accctggcggaatacggcttccgcctgccgtcctgcatcgacaaccgcccgctcaagttc
gacgaatgggaggcgatgcggccccagaccatccacgtctcggccacgccccagacctgg
gagatggaacaggcgggcggcgtcttcgtcgaacaggtcatccgcccgaccggcctgatc
gaccccccggtcgagatccgccccgttagcggcacgacccgcaaccaggtcgacgacgtc
atcgacgaggtcaaacagacggcccgcaacggctaccgttcgctggtcaccgtcctgacc
aagaagatggccgaggacctgaccgaatacatgcacgaacagggcgtccgcgtccgctac
atgcactccgacgtcgacaccatggagcggatcgagatcatccgcgacctgcgcctgggc
acgttcgacgtcctgatcggcatcaacctgctgcgcgagggtctggacatccccgagtgc
ggcctggtcgccatcctcgatgcggacaaggagggcttcctgcgctccgagacctcgctg
atccagaccatcggccgcgcggcccgcaacgtcgacggccgcgtcatcctctacgccgac
cgcatgaccggctcgatggagcgcgccatcgccgagaccaaccgacgccgcgaacggcag
gaggcgtacaacgccgaacacggcatcacgcccgagagcgtgaagcgcgacatcaaggaa
atcctcgacagcccctacgagaaggaccgcgtcctgatccccacgggcgtcaaggaagag
agccgccccttcatcggcaacaatttccaggccgccctgcgcgacatggaggccaagatg
cgcgaggccgcctccaacctcgagttcgaggaagccggtcgcctccgcgacgagatcaaa
cggctgaaactgctcgacctggagtttgccaacgaggtgctgaccggggatgggcaggac
gtggatgcgtcagcgccgaagcggtggcggaaggaggctcaggcggaggcgcaggagcgg
tttaggaaggggcggtag
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integrated database retrieval system
