Brevundimonas sp. NIBR11: KKHFBJBL_00928
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Entry
KKHFBJBL_00928 CDS
T10976
Symbol
rsmB_1
Name
(GenBank) Ribosomal RNA small subunit methyltransferase B
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
bren Brevundimonas sp. NIBR11
Brite
KEGG Orthology (KO) [BR:
bren00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bren03009
]
KKHFBJBL_00928 (rsmB_1)
Enzymes [BR:
bren01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
KKHFBJBL_00928 (rsmB_1)
Ribosome biogenesis [BR:
bren03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
KKHFBJBL_00928 (rsmB_1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
FtsJ
Motif
Other DBs
NCBI-ProteinID:
WGM30698
LinkDB
All DBs
Position
978089..979504
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AA seq
471 aa
AA seq
DB search
MTPAARLAAAASVLDSIAQGRQPAEAVLKAWGAANRYAGSKDRRAIADQVYKILRARGRL
VWAMGGREDGRALVIGSLSLIDGLSLEEIEALHSGDGYGPKPLSKQERARISLTDDGAPA
WALAGLPEFVVEDFKNTFGDRWAEEAAALMQPRAPIDLRVNLAKASVKEVEAELRAEGLS
PDRTPWSAAGLRLAAEPPPNVQALEAFKQGRMEIQDEGSQITCWLAGVQPGMTVVDYCAG
GGGKTLGLAMQGLAVGASRTEAAPPEDDKVWSPTGWVDAPKTKAKPATIAKAEGRLIACD
VVQKRLDNIRPRLARAGVEAELIHLGPNGGGVEDIIGQADVVFVDAPCTGSGTWRRKPED
AWRLSVEDVDRMHSLQKAILARAAKLVKPGGRLVYVTCSMLRQENEASVDAFEEDHDDFV
PVAISDALNNPAVTDAGRAKLAEIAEGHRLRMSPAATGTDGFFAAVYERVA
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
gtgaccccagccgctcgtctcgccgccgccgcctccgtcctcgacagcatcgcccaggga
cgccagccggccgaggccgtcctcaaggcctggggagccgccaaccggtacgccgggtcc
aaggaccgccgcgccatcgccgatcaggtctacaagatcctgcgcgcgcgcggccgtctg
gtctgggccatgggcgggcgcgaggacgggcgagcgctggtcatcggctcgttgagcctt
atcgacggcctgtcgctggaagagatcgaggctctgcactcgggcgacggctacggcccc
aagcccctgtcgaagcaggaacgcgcccgcatcagcctgactgacgacggcgccccggca
tgggcgctcgccggcctgcccgagttcgtggtcgaggacttcaagaacaccttcggcgac
cgctgggccgaggaggcggctgcattgatgcagccgcgggcgccgatcgatctgcgcgtc
aatctggcgaaggcgtcggtgaaggaggtcgaggccgaacttcgcgccgagggcctgtcg
cccgatcgcacgccgtggtcggccgccggcctgcgtctcgccgccgagccgccgccgaac
gtccaggcgctggaggccttcaaacagggccgcatggaaatccaggacgaaggcagccag
atcacctgctggctggccggcgtccagcccggcatgaccgtcgtcgactattgcgccggg
ggcgggggcaagaccctgggcctggcgatgcagggtctggccgtcggcgcctcgcgtact
gaagccgcgcctcccgaggatgacaaggtctggagcccgaccggttgggtcgatgcgccg
aaaacgaaggccaagccagccacgatcgccaaggctgagggccgtctgatcgcctgcgac
gtggtccagaagcggctcgacaacatccggccccggctggcccgcgcgggcgtggaggcg
gagctgatccaccttggccccaacggcggcggcgtcgaggacatcatcggtcaggcggac
gtcgtgttcgtcgatgcgccctgcaccggatccggcacctggcggcgcaagcccgaggac
gcctggcgcctgagcgtcgaggacgtcgaccggatgcactcgctgcagaaggcgatcctc
gcccgggccgccaagctggtgaagccgggtggccgtctggtctatgtgacctgttccatg
ctgcgtcaggagaacgaggccagcgtagacgccttcgaggaggatcacgacgacttcgtc
ccggtcgccatctccgatgcgttgaataacccagctgtcaccgatgcaggccgcgcgaag
ttggccgagatcgccgaaggtcaccgcctgcgcatgtcgccggccgccaccggcaccgac
ggcttcttcgccgccgtctatgagcgcgtggcgtga
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