Brevundimonas sp. NIBR11: KKHFBJBL_01111
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Entry
KKHFBJBL_01111 CDS
T10976
Symbol
ycbB
Name
(GenBank) putative L,D-transpeptidase YcbB
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
bren Brevundimonas sp. NIBR11
Brite
KEGG Orthology (KO) [BR:
bren00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bren02000
]
KKHFBJBL_01111 (ycbB)
Transporters [BR:
bren02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
KKHFBJBL_01111 (ycbB)
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Ortholog
Paralog
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
DUF6491
Motif
Other DBs
NCBI-ProteinID:
WGM30877
LinkDB
All DBs
Position
complement(1155912..1157489)
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AA seq
525 aa
AA seq
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MNRRELTLGAAVSALAAPAMAQTAPQNAPAQAAVAAPVSQYQAAFLAQLDRMPASAQPDI
RAFYELNGWRPVWNAARLRALTQASSRAERHGLSRSDYFDFVGLAADPETADMRTTAAAL
TYARVLAEGAVRPETVEELWEMQKNRVDLPVGLNDALVQNKLVEWFEGLAPTDIGYSNLS
AGYVRYRRIIRQGGWPRFVARSGTIEPGSSDNRVPVLIARLVAEGDLSAADGARLTAEGL
VYGPELQAAMRGFQARHGLAADGRIGAGTQSSLGASADDRARQIALNLERRRWLKRELNP
ERIEVNTAAAIMVYWKDGRPVHSNRVVCGAPATQTPSLEKPFASVVANPPWYVPAGIARR
EILPRGPGYLASQNMYVSNGTVIQRAGPTAALGYVKFELRDSYAIFLHDTPSKAAFNLSM
RQRSHGCVRVQNAVEFARILLTPDPVLLGEFDDAQVSRDTRRIQTGREITVRLLYWTAFV
DGQGRVAFREDVYRRDQKLAEALGIAVSLPAVVDDGTAVANDVGP
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgacgcgaactcactctcggcgccgccgtttcggccctcgccgcgccagccatg
gcccagaccgcgccgcagaacgcccccgcccaggccgccgtcgccgccccggtcagccag
tatcaggccgccttcctggcgcagctggaccgcatgcccgcgtccgcccagcccgacatc
cgcgccttctatgagttgaacggctggcgtcccgtctggaacgcggcccgcctgcgcgcc
ctgacccaagcctcgtcgcgcgccgaacgccacggcctgtcgcgttcggactatttcgac
ttcgtgggtctggccgccgatcccgagacggcggacatgcgcaccacggccgccgccctg
acctacgcccgcgtcctcgccgagggcgccgtccgtcccgagacggtcgaagagctgtgg
gagatgcagaagaaccgcgtcgacctcccggtcggcctgaacgacgccctggtccagaac
aagctggtcgaatggttcgagggcctggccccgaccgacatcggctattccaacctttcg
gccggctacgtccgctaccgccggatcattcgccagggcggctggccccgcttcgtcgcc
cgctccggcacgattgagccgggatcgagcgacaaccgcgtcccggtcctgatcgcccgt
ctggtggccgagggcgacctgtcggccgcggacggcgcccggctgacggccgagggtctg
gtctacggtcctgagcttcaggccgccatgcgcggcttccaggcccgccacggcctggcc
gccgacggccgcatcggcgccggcacccagagctcgctcggcgcctcggccgacgatcgc
gcccgccagatcgccctcaacctggaacgccgccgctggctgaagcgcgagctgaatccc
gagcggatcgaggtcaacaccgccgccgccatcatggtctactggaaggacggccggccg
gttcactccaaccgcgtcgtctgcggcgccccggcgacccagacgcccagcctggagaag
cccttcgcctcggtcgtggccaacccgccctggtacgtcccggccggcatcgctcgccgc
gagatcctgccgcgcggcccgggctatctggcttcgcagaacatgtatgtctcaaacggc
acggtgattcagcgcgccggcccgaccgccgctctgggctatgtgaagttcgagctgcgc
gacagctacgctatcttcctgcacgacaccccgtccaaggccgccttcaacctgtcgatg
cgccagcgctcgcacggctgcgtccgcgttcaaaacgcggtcgagttcgcccgcatcctg
ctgacgcccgatcccgtgttgctgggcgagttcgacgacgcccaggtcagccgcgacacc
cgccgcatccagacgggccgcgagatcaccgtgcgcctgctctactggaccgctttcgtc
gacggccagggccgcgtggccttccgcgaggacgtctaccgccgcgaccagaagctggcc
gaagccctgggcatcgcggtcagcctgccggccgtggtcgacgacgggacggccgtggcc
aacgacgtcgggccgtag
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