Brevundimonas sp. NIBR11: KKHFBJBL_01330
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Entry
KKHFBJBL_01330 CDS
T10976
Symbol
phrB
Name
(GenBank) (6-4) photolyase
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
bren Brevundimonas sp. NIBR11
Brite
KEGG Orthology (KO) [BR:
bren00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bren03400
]
KKHFBJBL_01330 (phrB)
Enzymes [BR:
bren01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
KKHFBJBL_01330 (phrB)
DNA repair and recombination proteins [BR:
bren03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
KKHFBJBL_01330 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
WGM31090
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All DBs
Position
1348545..1350110
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AA seq
521 aa
AA seq
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MPKPSTAAVGTLRLVLGDQLSDTLSALRDIDPERDVVLMAEVMAEATYVRHHKQKIALIF
AAMRNFAARLEARGVTVRYVRIDDPDNTHSIVGELHRSLDDQPFESVAITECGEWRLAEA
LAAFAGVAAVPVEIRADDRFLCSHDRFRRWASGKSELRMEYFYREMRRATNLLLEDGKPI
GGHWNYDAENRKKLTKGLRPPARLRIPPDAVTKQAIADVARLFPDHFGDLDAFGWPVTTE
QAEAVLADFLTNILPGFGDWQDAMAHGEPWMWHGLISTSINLGLLEPLDVCRRAEAEYHA
GRAPLNAVEGFIRQIIGWREFVRGIYWLKVPEYRQRNFLDADRTLPWFYWSGETDMACVA
DVVSMTRSHAYAHHIQRLMVTGNLAMLLGVHPDEIDDWYMVVYADAYEWVEMPNTRGMAT
FADGGITGSKPYASSGAYIDRMSDYCETCRYDVKAKAGENACPFNRLYWGFLERNQKRLR
DNHRLAMPYRTLEKFGPERRAELLAEAEGARTALGAVLRSG
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagcctagcacggccgccgtcggcacgcttcgcctcgtgctgggtgaccagctg
tccgacaccctgtcggctttgcgagacatcgatccggagcgcgacgtcgtgctgatggcc
gaggtcatggcggaggcgacctacgtccggcatcacaagcagaagatcgcgctgatcttc
gctgccatgcgcaacttcgccgcgaggctggaggcgcgcggcgtaacggtccgctacgtc
cgcatcgacgatcccgacaatacccactccatcgttggcgaactgcatcgctccctggac
gaccagccgttcgagtccgtcgcgatcaccgaatgcggcgagtggaggctggccgaggcc
ttggccgccttcgctggcgtcgccgccgtcccggtcgagatccgcgcggacgaccgattc
ctctgttcccacgaccgcttccgccgttgggcctcgggcaagagcgaactgcgcatggag
tatttctatcgcgagatgcgccgcgccactaacctgctgctcgaggacggcaagccgatc
ggcggccactggaactatgacgccgagaaccgcaagaagctgaccaagggcctgcgtccg
cccgcgcggttgcggatcccgccggacgcggtcacgaagcaagcgatcgccgacgtcgcc
cgcctgttccccgaccatttcggcgatctcgacgccttcggctggccggtaacgacggaa
caggccgaggcggtgctggccgactttctgacgaacattctgccgggcttcggagactgg
caggacgcgatggcgcacggcgagccgtggatgtggcacggactgatctcgacctcgatc
aacctcggcctactggagccccttgacgtctgccgccgcgccgaagccgagtatcacgca
ggccgcgcgcctctgaacgcggtcgagggcttcattcgccagatcatcggctggcgagag
ttcgtgcgcggcatctactggttgaaggtcccggaatatcgccagcgcaatttcctcgac
gccgaccggaccctgccgtggttctactggtcgggcgaaacggacatggcctgcgtcgcg
gacgtcgtctcgatgacccgcagccacgcctacgcccaccatatccagcggctgatggtg
accggcaacctcgccatgctgctcggcgtccatcccgacgagatcgatgactggtacatg
gtcgtctacgccgacgcctatgagtgggtggaaatgcccaacacccgcggcatggctacc
ttcgccgacggaggcatcacggggtcgaagccctatgcgtcgtcaggcgcctacatcgac
cggatgagcgactactgcgaaacctgccgctacgacgtgaaggccaaggcgggcgagaac
gcctgtccgttcaatcgcctatactggggttttctggagcgaaatcagaagcggctgcgg
gacaatcatcgcctcgccatgccctatcgcacgctggaaaagttcgggcccgaacgccgc
gccgagctgctcgcggaggcggaaggcgcgaggacggcgctgggcgcggttctcagatcc
ggctga
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