Brevundimonas sp. NIBR11: KKHFBJBL_01788
Help
Entry
KKHFBJBL_01788 CDS
T10976
Symbol
xthA_2
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
bren Brevundimonas sp. NIBR11
Pathway
bren03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bren00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KKHFBJBL_01788 (xthA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bren03400
]
KKHFBJBL_01788 (xthA_2)
Enzymes [BR:
bren01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
KKHFBJBL_01788 (xthA_2)
DNA repair and recombination proteins [BR:
bren03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
KKHFBJBL_01788 (xthA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
WGM31541
LinkDB
All DBs
Position
complement(1759599..1760411)
Genome browser
AA seq
270 aa
AA seq
DB search
MRIATYNVNGVNGRLAVLLRWLEETQPDIVCLQELKAPQEKFPKAALEAAGYTAYWHGQK
SWNGVAILARGRDIHGTRRGLPHDPDPSQSRYIEAAVNGVLIGCLYLPNGNPTPGPKFDY
KMRWFEALTAHAASLLATGAPVVLIGDFNVMPTELDVYKPERWLDDALFRPEVRDAFSGL
VAQGWTDGIRTLHPTARIYTFWDYFRNAFVRDAGLRIDHILLSPSLKKRLKSGGVDRHVR
GWDKTSDHAPVWIELKAPIASRRRATPRAS
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
gtgagaatcgcgacctacaacgtgaacggcgtgaatggtcgcctcgccgtccttctgcgg
tggctggaggagacgcagcccgacatcgtctgcctgcaggagctgaaggcgccgcaggag
aagtttcccaaggctgctctcgaagcggcggggtacacggcctactggcacggtcagaaa
agctggaacggcgtggccatcctcgcgcggggccgcgacatccatgggacgcggcgcggt
ttgccccacgacccggacccgagccagagccgctacatcgaggcggccgtcaacggcgtg
ctgatcggctgcctctacctgcccaacggcaatccgacgcccggacccaagttcgactac
aagatgcggtggttcgaggccctgaccgcccatgcggccagtctactcgcgaccggtgcg
ccggtggttctcatcggcgacttcaacgtgatgccgaccgagttggatgtctacaagccc
gagcggtggttggacgacgccctgtttcggcccgaggtgcgcgatgcgttttctgggctg
gtggcgcagggctggaccgacgggatccgaaccctgcacccgacggcgcgcatctacacc
ttctgggactacttccggaacgccttcgttcgcgatgccggcctgcggatcgatcacatt
ctgctcagcccgtcactcaagaaacggctcaagagcggcggggtggatcgccatgttcgc
ggctgggacaagacgagcgaccatgccccggtctggatcgagttaaaggcgcccattgcg
tcgcgaaggagggccacgccgcgcgcgtcgtga
DBGET
integrated database retrieval system
