Brevundimonas sp. NIBR11: KKHFBJBL_02129
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Entry
KKHFBJBL_02129 CDS
T10976
Name
(GenBank) hypothetical protein
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
bren Brevundimonas sp. NIBR11
Pathway
bren00040
Pentose and glucuronate interconversions
bren01100
Metabolic pathways
bren01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
bren00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
KKHFBJBL_02129
Enzymes [BR:
bren01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
KKHFBJBL_02129
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase22
PD40
Tricorn_N
TAT_signal
DUF276
Motif
Other DBs
NCBI-ProteinID:
WGM31879
LinkDB
All DBs
Position
complement(2109958..2111400)
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AA seq
480 aa
AA seq
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MTIQTSRRTALKALLAAPAVGALAGAVQAQTAPVEAPAGAPVFPAPNTAPSIHQVGDTPP
PWPTWDGPVPTDWVDPKTGHRIVRLSGDEGGNKLYFYRSMFTPEGDVFVFSSSAGIIKVE
LNNGFRRSVLIADGNAELLLTGRKTRTVYYTVVDPGEGQPGDRGRTLFAADIDSGQSRRI
AHLEQGGFSSINADETLCVGTVAYGAPPLQPDAPDPRNRRAGQAEYAALGPDGRPLNFAK
AKGVRMLQRWAARVPMELFVVDLRTGGRRVIHSATDWLNHPQFSPTDPDRIIFSHEGPWH
RVDRMWTIKTDGSDLRKLHQRTMNFEIFGHEWFAPDGKSVMYDLQTPRGQVFWVASVDLE
TGKRIYRRVEQNAWSVHYNTAPDGTVFAGDGGDADMVAHAPDGKWLVLLKPEPLVDGDPD
SDQPDLISVEYLRAERLVDMSLHDYRLEPNVTFTPDGQWVLYVSNMHGRNHVYAASVRRD
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgacgatccagacctcgcgccgcaccgccctgaaggccctgttggccgcccccgccgtc
ggggccctggccggcgccgtccaggcccagaccgcgccggtggaagcgcccgccggcgcc
cccgtctttccggccccgaacaccgccccgtcgatccatcaggtcggcgacacgcctccg
ccctggccgacgtgggacggtccggtcccgaccgactgggtcgatcccaagaccggtcac
cgcatcgtccgcctgtccggcgacgagggcggcaacaagctctatttctatcgcagcatg
ttcacgcccgagggcgacgtcttcgtcttctcgtcgtcggccgggatcatcaaggtcgaa
ctgaacaacggcttccgccgctcggtgctgatcgccgacgggaacgccgagctgctgctg
accggccgcaagacccgcaccgtctattacaccgtcgtcgatccgggcgagggccagccc
ggcgatcgcggtcgcaccctgttcgcggcagacatcgacagcggccagtcccgccgcatc
gcccacttggaacaaggtggattctcctcgatcaacgccgatgagaccctctgcgtcggc
acggtcgcctatggggccccgccgctgcaacccgacgcccccgacccccgcaaccgccgc
gccggtcaggccgagtacgccgccctcggccccgacggccgcccgctgaacttcgccaag
gccaagggcgtgcgcatgcttcagcgctgggccgcccgggtgccgatggagctcttcgtc
gtcgatctccggaccggtgggcgtcgcgtgatccattcggccaccgactggctgaaccac
ccgcagttctcgccgaccgatcccgaccggatcatcttctcgcacgaggggccgtggcac
cgggtcgaccggatgtggaccatcaagaccgacggcagcgacctgcggaagctgcaccag
cgcacgatgaatttcgaaatcttcggccacgagtggttcgcgcccgacggcaagtcggtg
atgtacgacctgcagacccctcgtggtcaggtcttctgggtcgcctcggtcgatctggag
actggcaaacgcatctaccgccgggtcgagcagaacgcctggtcggtccactacaacacc
gcgccggacgggaccgtcttcgccggcgacggcggggacgccgacatggtcgcccatgcg
cccgacggaaaatggctggtgctgctgaagcccgaaccccttgtcgacggcgatcccgac
agcgaccagccggacctgatctcggtcgaatatctgcgcgccgaacggctcgtggacatg
tcgctgcacgactaccggctcgagcccaacgtcaccttcacgccggacggccagtgggtg
ctctacgtttcgaacatgcacggccggaatcacgtctatgcggcgtccgtgcgccgcgat
tga
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