Brevundimonas sp. NIBR11: KKHFBJBL_02733
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Entry
KKHFBJBL_02733 CDS
T10976
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bren Brevundimonas sp. NIBR11
Pathway
bren03030
DNA replication
bren03410
Base excision repair
bren03420
Nucleotide excision repair
bren03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bren00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KKHFBJBL_02733 (polA)
03410 Base excision repair
KKHFBJBL_02733 (polA)
03420 Nucleotide excision repair
KKHFBJBL_02733 (polA)
03440 Homologous recombination
KKHFBJBL_02733 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bren03032
]
KKHFBJBL_02733 (polA)
03400 DNA repair and recombination proteins [BR:
bren03400
]
KKHFBJBL_02733 (polA)
Enzymes [BR:
bren01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KKHFBJBL_02733 (polA)
DNA replication proteins [BR:
bren03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KKHFBJBL_02733 (polA)
DNA repair and recombination proteins [BR:
bren03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
KKHFBJBL_02733 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KKHFBJBL_02733 (polA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
Taq-exonuc
DNA_polI_exo1
HHH
Motif
Other DBs
NCBI-ProteinID:
WGM32481
LinkDB
All DBs
Position
complement(2733713..2736700)
Genome browser
AA seq
995 aa
AA seq
DB search
MAKPGFDARPGDADPAPAYVRPMSDTAAPQALSEDRPLTQDGPAVRLWLIDASAYIFRAY
HALPPLTRKSDGLPVGAVQGYCNMLWKLLKDMKGADGPTHLAAIFDHSEKTFRNDLYDLY
KANRSAPPEDLVPQFPLVREATAAFGVHCVELPGYEADDLIATYACKVRDMGGECVIVSS
DKDLMQLIGPSVVMWDPMKDRRLAEEAVMEKFGVTPDKMIDLQALIGDSVDNVPGAPGIG
PKTAAQLLDEYGDLDTLLERAGEIKQPKRRETLINFRDQILLSRELVKLTCDAPAPEAID
DFKMRDPDPAVLSAFLEAMEFRSLQRRVGDGKLAGHDGSAFAPARPAPLTAPVISPRYAP
QAVPEGVEKQAVDHDSYRCIQTLEELDAFLARATEAGIVGFDTETDALSATHAGLCGVSL
AIGPNDACYIPLTHEHEPMAGSGGLDFGGEGDTRTPLEQLDKPTVLARLKTLLEDPAVLK
VVQNGKYDLTVMARRGIRVAPTDDTMLISYVLEGGLHGHGMDELSRLHLGHDPIPFKHVA
GVGRQQKSFKHVELKPATCYAAEDADVTLRLWRILKPRLAAEGLATVYETLERPLPAVLS
DMELEGIRVDPARLRRLSSEFGLRMAELEQQAHELAGRPFSIGSPKQIGELLFGELNLTG
GKKTASGQWETGAATLEALAETHPLPRAILDWRQLSKLKGTYTDALVAAMDEKTDRVHTS
YQLAAATTGRLASSDPNLQNIPIRTETGRQIRQAFIARDGCVLISADYSQIELRLLAHIG
DIPELKRAFKAGIDIHTATASEMFGVPVAEMDPETRRRAKAINFGIVYGISAFGLSNQLG
IDQSEAGAYIKTYFERFPGIRDYMDKTRAEVRQAGFVSTVFGRRIHIPAIHSKSGAERQF
GERAAINAPIQGAAADIIRRAMIRMPSALEAAGLSEVKMLLQVHDELVFECPDALAETAI
PVIRRVMEGAAEPAVALTVPLVVEAKAAKNWDEAH
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atggccaagccgggtttcgacgcccggcccggtgacgcagacccggcgcccgcctatgtt
cgccccatgtccgacaccgccgcgccccaagccctttccgaagatcgccctctcactcag
gacgggcccgccgtgcggctgtggctgatcgacgcctcggcctacatcttccgcgcctac
catgcgttgccgcccctgacgcgaaagtccgacggcctgccggtcggtgcggtgcagggc
tactgcaacatgctgtggaagctgctgaaggacatgaagggcgccgacggtccgacccac
ctggccgccatcttcgaccattctgagaagacgttccggaatgacctctacgacctctac
aaggccaaccgctcggccccgcccgaggatctggtgccgcagtttccgctggtgcgtgag
gcgacggcggccttcggcgttcactgcgtggaactgcccggctacgaggccgacgatctg
atcgcgacctatgcctgcaaggtccgggacatgggcggggagtgcgtgatcgtctcgtcc
gacaaggacctcatgcagctgatcggcccctcggtcgtgatgtgggacccgatgaaggac
cgccgcctggccgaagaggcggtgatggagaagttcggcgtgaccccggacaagatgatc
gacctccaggccctgatcggcgacagcgtcgacaacgtccctggcgcccccggcatcggt
cccaagacggccgcacagctgctggacgaatacggcgatctcgacacgcttctggagcgg
gccggggagatcaaacagcccaagcggcgcgagactctgatcaatttccgggatcagatc
ctgctcagccgcgagctggtgaaactgacctgcgacgccccggcgcccgaggccatcgac
gatttcaagatgcgcgatcccgatccggccgtgctgtccgccttcctggaggcgatggag
ttccgcagccttcagcgccgcgtcggcgacggcaagctggcggggcacgacggctcggcc
ttcgcccccgcccggcccgcccccctgaccgctccggtcatctcgcctcgctatgcgccc
caggctgttccggagggcgtcgagaaacaggcggtggatcacgactcgtaccgctgcatc
cagacgctagaggagctggacgccttcctggcgcgggcgacggaggcggggatcgtcggc
ttcgacaccgagacggacgccctgtcggcgacgcatgcggggctgtgcggagtcagcctg
gccatcgggccgaacgacgcctgctacatccccctgacccacgagcacgagccgatggcg
ggatcgggcgggctggatttcggtggcgagggcgatacgcgcacgccgctggagcagctc
gacaagcccaccgtcctggcgcggctcaagaccctgctggaggaccccgccgtgctgaag
gtcgtgcagaacggcaaatacgatctgaccgtcatggcgcggcgaggcattcgggtcgcg
ccgaccgacgacaccatgctgatctcctatgtgctggaggggggcctgcatgggcacggg
atggacgagctcagccgtctgcatctcggccacgaccccatccccttcaagcacgtcgcc
ggcgtcggccgtcagcagaagtcgttcaagcacgtcgagctgaaaccggcgacctgctac
gccgccgaggacgcggacgtgacgctccgtctatggcgcatcctcaagccccggctggcg
gcggagggactggcgacggtgtacgagaccctggaacggcccctccccgccgtcctgtcc
gacatggagctggaggggatccgcgtcgatcccgcccgcctgcgccgcctgtcgtcggag
ttcggcctgcgcatggccgagctggagcaacaggcgcacgaactggccggccgccccttc
tcgatcggcagtcccaaacagatcggcgagcttctgttcggcgagctcaacctgaccggc
ggcaagaagaccgcctcgggccagtgggagaccggcgccgccacgctggaggccctggct
gagacccaccccctgccgcgcgccatcctggattggcgccagctgtccaagctgaagggc
acctataccgacgccctggtcgcggcgatggacgagaagaccgaccgggttcacaccagc
tatcagctggccgccgccaccaccggccgcctcgcctcctcggacccgaacctccagaac
atccccatccgcaccgagaccggccgccagatccgccaggccttcatcgcgcgcgacggc
tgcgtcctgatctcggccgactactcccagatcgagctgcggcttctggcccacatcggc
gacatccccgagctgaaacgcgccttcaaggccggcatcgacatccacacggccaccgcg
tcggagatgttcggcgtcccggtcgccgagatggaccccgagacccgccgacgcgccaag
gccatcaatttcggcatcgtctacggcatctccgccttcggcctgtcgaaccagctgggc
atcgaccagtccgaggccggggcctacatcaagacctatttcgaacgcttccccggcatc
cgcgactatatggacaagacccgcgccgaggtccgccaggcgggcttcgtctccaccgtt
ttcggccgccgcatccacatcccggccatccattcgaagtcgggcgccgaacgccagttc
ggcgaacgcgccgccatcaacgccccgatccagggcgccgccgccgacatcatccgccgc
gccatgatccgcatgccctcagccctcgaggccgccgggctttcggaggtcaagatgctg
ctccaggtccacgacgaactggtcttcgaatgcccggacgccctggccgaaaccgccatc
ccggtcatccgccgggtcatggaaggcgcggcggagccggccgtggccctcaccgtccct
ctggtcgtcgaggccaaggccgccaagaactgggacgaggcgcactag
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