Brevundimonas sp. NIBR11: KKHFBJBL_02888
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Entry
KKHFBJBL_02888 CDS
T10976
Symbol
miaB
Name
(GenBank) tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
bren Brevundimonas sp. NIBR11
Brite
KEGG Orthology (KO) [BR:
bren00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bren03016
]
KKHFBJBL_02888 (miaB)
Enzymes [BR:
bren01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
KKHFBJBL_02888 (miaB)
Transfer RNA biogenesis [BR:
bren03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
KKHFBJBL_02888 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
DUF3253
TRAM_2
DUF7292
Motif
Other DBs
NCBI-ProteinID:
WGM32634
LinkDB
All DBs
Position
complement(2890052..2891443)
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AA seq
463 aa
AA seq
DB search
MSDTLTRPEVETAAVPEGAKRLFIKTYGCQMNVYDSERMADVLRPLGYATTDSPEGADFV
ILNTCHIREKAGEKIYSELGKIRQMRERKLERGEGGMTIAVAGCVAQAEGEEIMLRAPAV
DIVVGPQAYHQLPELLTRTARSRGERIGADFAPNEKFDAMPAVRGVKGYTAFLTVQEGCD
KFCSFCVVPYTRGAEWSRPVEGVLAEARGLADQGVREVTLLGQNVNAYDGEGPDRTVWTL
ARLARALAEIPGLDRIRYTTSHANDMSDDLIAAHAELDALMPYLHLPVQAGSDRVLRLMN
RKHGRQKYIDLIGRIREARPDLALAGDMIVGFPGETDREFEDTLDLVRQVNYASCFSFMY
SPRPGTPAAAMPGQVPAEVMKARLKVLQNLLLEQQLAFNQAQAGKTLNILLEKKGRHARQ
AIGRSPYLQSVHVDGADHLLGQIVPVRIEQGNQNSLKGSLIGA
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacaccctgacccggcccgaggtcgagaccgctgctgtccccgaaggggccaag
cggctgttcatcaaaacctacggctgccagatgaacgtctatgacagtgagcgcatggcc
gacgtcctgcgcccactgggatacgccacgaccgacagccccgaaggcgccgacttcgtc
attctgaacacctgccacatccgcgagaaggcgggcgagaagatctattccgagctgggc
aaaatccggcagatgcgcgagcgcaagctggagcggggcgagggcggcatgaccatcgcg
gtcgccggttgcgtcgcccaggccgagggcgaagagatcatgctgcgggccccggcggtc
gacatcgtcgtcggcccccaggcctatcaccagctgcccgagcttctgacacgcaccgcc
cggtcgcggggcgagcggatcggcgccgacttcgcccccaacgaaaagttcgacgccatg
ccggccgtgcgcggggtcaagggctacaccgcattcctcaccgtgcaggaggggtgcgac
aaattctgcagcttctgcgtcgtcccctatacccgcggcgccgaatggtcgcggccggtc
gagggcgtcttggccgaggcgcgcggtctggcggaccaaggggtacgcgaggtcaccctg
ctgggtcagaacgtcaacgcctatgacggggaggggccggatcggacggtctggaccctg
gccagactggcgcgggccctggccgaaatcccggggctggaccgcatccgctatacgacc
agccacgccaatgacatgtccgacgacctgatcgcggcccatgccgagctggacgcgctc
atgccctacttgcacctgccggtgcaggccgggtcggaccgagtcctgcggctgatgaac
cgcaagcatgggcgtcagaaatacatcgacctcatcggccgcatccgcgaggcgcgaccc
gacctggccctggccggcgacatgatcgtcggcttccccggagagaccgatcgcgagttc
gaggacacgctcgatctggtgcggcaggtcaactacgcgtcctgtttctccttcatgtat
tcgccgcgcccgggcacgcccgccgccgccatgcccggtcaggtcccggccgaggtgatg
aaggcgcggctgaaggtcttgcagaacctgctgctcgaacagcagctcgccttcaaccag
gcgcaggcgggcaaaactctgaacatcctgctcgagaagaagggccgccatgcgaggcag
gccattgggcgctccccctatctccaatccgtgcatgtcgacggcgcggatcatctgctc
ggccagatcgttccggtcaggatcgaacagggcaaccagaacagtctgaaaggcagcctg
attggcgcgtga
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