Brevundimonas sp. NIBR11: KKHFBJBL_02911
Help
Entry
KKHFBJBL_02911 CDS
T10976
Symbol
rho
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bren Brevundimonas sp. NIBR11
Pathway
bren03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bren00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KKHFBJBL_02911 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bren03021
]
KKHFBJBL_02911 (rho)
03019 Messenger RNA biogenesis [BR:
bren03019
]
KKHFBJBL_02911 (rho)
Transcription machinery [BR:
bren03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
KKHFBJBL_02911 (rho)
Messenger RNA biogenesis [BR:
bren03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KKHFBJBL_02911 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
ATPase_2
AAA_22
OB_RNB
AAA
S1CSD-TOTE-2
DUF6360
Spore_III_AA
AAA_25
NACHT
Motif
Other DBs
NCBI-ProteinID:
WGM32657
LinkDB
All DBs
Position
2913532..2914977
Genome browser
AA seq
481 aa
AA seq
DB search
MTDVTDTPEDNTKIDAVDGDASDVADTSQSDGANDADVAADIGDIAEEEGAEEEGEPVVP
SGRITLQELNDKTPVELVAFAEQLEIENASNLRKQDLLFAILKTLADEEVEIIASGTLEM
LPDGFGFLRSPDANYLPGPDDIYVSPSQIRRFGLRSGDTVHGAVRGPREGERYFALLKVD
TINFEDPETVRTKVNFDNLTPLYPNERLTMEIQDPTLRDRSGRVIDIVAPLGKGQRCLIV
APPRVGKTVMLQNIAKSIEANHPEVSLIVLLIDERPEEVTDMQRTVKGEVVASTFDEPAT
RHVAVAEMVIEKAKRLVEHKKDVVILLDSVTRLGRAYNATVPSSGKVLTGGVDANALQRP
KRFFGAARNVEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPA
IDVLKSGTRKEELITPKDQLTKTYVLRRILNPMGPQDAIEFLLDKLRQSKNNSDFFQSMN
T
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgtcaccgacacccccgaagacaacaccaagatcgacgccgtggacggcgac
gcctcagacgtcgctgacacctcccagtccgatggtgcgaacgacgccgacgtggccgcc
gacatcggcgacatcgccgaggaagagggggccgaagaagagggcgaacccgtcgtcccg
tcgggccgcatcaccctgcaggaactgaacgacaagaccccggtggagctggtcgccttc
gccgaacagcttgagatcgagaacgcctcgaacctgcgcaaacaggatctgctgttcgcc
atcctcaagaccctggccgacgaggaggtcgagatcatcgcctccggcaccctcgagatg
ctgccggacggcttcggcttcctgcgctcgccggatgccaactaccttccgggtccggac
gatatctacgtgtcgccgtcccagatccgccgcttcggcctgcgctcgggcgacacggtc
cacggcgcggtgcgcggcccgcgcgagggcgagcgctacttcgccctgctcaaggtcgac
acgatcaacttcgaggaccctgagacggtccgaaccaaggtcaatttcgacaacctgacc
ccgctctatccgaacgagcggctgaccatggagatccaggacccgaccctgcgcgatcgt
tcgggccgggtcatcgacatcgtcgccccgctcggcaagggccagcgctgcctgatcgtc
gccccgccgcgcgtcggcaagacggtcatgcttcagaacatcgccaagtcgatcgaggcc
aaccaccccgaggtttcgctgatcgtcctgctgatcgatgaacgcccggaagaagtcacc
gacatgcagcgcaccgtgaagggcgaggtcgtggcttccaccttcgacgagcccgctacc
cgccacgtcgccgtcgccgagatggtgatcgaaaaggccaagcgcctggtcgagcacaag
aaggacgtcgtgatcctgctggactcggtcacccgtctcggccgcgcctacaacgccacc
gtcccatcgtcgggcaaggtcctcaccggtggcgtcgacgccaacgccttgcagcgaccc
aagcggttcttcggggcggcgcgcaacgtggaggagggcggttcgctgacgatcatcgcc
acggccctgatcgacacgggctcgcgcatggacgaggtgatcttcgaagagttcaagggc
accggcaactcggaaatcgtcttggaccgcaaggtcgccgataagcgcatcttcccggcc
atcgacgtgctgaagtccggcacccgcaaggaggagctgatcacgccgaaggaccagttg
accaagacctacgtcctgcgtcgcattctgaacccgatgggcccgcaggatgccattgag
ttcctgctcgacaagctgcgccagtccaagaacaacagcgacttcttccagtcgatgaat
acctaa
DBGET
integrated database retrieval system
