Brevundimonas sp. NIBR11: KKHFBJBL_02919
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Entry
KKHFBJBL_02919 CDS
T10976
Name
(GenBank) hypothetical protein
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
bren Brevundimonas sp. NIBR11
Pathway
bren03030
DNA replication
bren03430
Mismatch repair
bren03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bren00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KKHFBJBL_02919
03430 Mismatch repair
KKHFBJBL_02919
03440 Homologous recombination
KKHFBJBL_02919
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bren03032
]
KKHFBJBL_02919
03400 DNA repair and recombination proteins [BR:
bren03400
]
KKHFBJBL_02919
Enzymes [BR:
bren01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KKHFBJBL_02919
DNA replication proteins [BR:
bren03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KKHFBJBL_02919
DNA repair and recombination proteins [BR:
bren03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KKHFBJBL_02919
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
WGM32665
LinkDB
All DBs
Position
complement(2921337..2922389)
Genome browser
AA seq
350 aa
AA seq
DB search
MILAKRPEVDRFLAKPDAGIRAAVIHGKDRSGVAERAEILCKAITPDLNDPFNVTLLTDS
DIDGDEARLEEALTALSMIGGRRLVRVRLGGDKASVDKMLAGALKTHAEGLFNPDCMLVV
EAGALGRDSALRKAAEAGRGSVGIACYEDEAGDIARMTREALAEDKVGLTTDALQAFVAR
LPRERGLMRQEIERLALYVGPGSGRTIDVEELEAHLGVEADASLSDAALQAFGGRAAPAQ
GGLRRALAEGESAVMAVRSASIHLGKLRRINVLQANGAGAKEAAKAAGVFWKQENEMLRQ
ARAWRLEELDVVQDSVNMADVATKTTGMPEHLIAERLLLEIAARARRLGL
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgattctcgccaagcggcccgaggtggaccgcttcctggcgaagcccgacgccggaatc
cgcgccgccgtcatccacggcaaggaccgctccggcgtcgccgagcgcgccgagatcctg
tgcaaggccatcactcccgacctgaatgacccgttcaacgtcaccctcctgaccgactcc
gacatcgacggcgacgaagccaggctggaagaggccctgacggcgctgtccatgatcggc
ggccggcgcctggtccgcgtccgtctgggcggcgacaaggcctccgtcgacaagatgctg
gccggggcgttgaagacccacgccgagggcctgttcaaccccgactgcatgctggtggtc
gaggccggagcgctgggccgcgactccgccctcagaaaggccgccgaggccggcaggggc
tccgtcggcatcgcctgctacgaggacgaggccggcgacatcgcgcgcatgacccgcgag
gccctggcggaggacaaggtgggcctgaccaccgatgcccttcaggccttcgtcgcccgc
ctgccccgcgaacgcggcctgatgcgtcaggagatcgagcgcctcgctctctacgtcggc
cccggctcgggccgaaccatcgatgtcgaggagctggaggcccacctcggggtcgaggcc
gacgcctccctgtcggacgctgccttgcaagccttcggcggccgggccgccccggcgcaa
ggcggcctgcgccgcgccttggcggagggcgagagcgccgtcatggccgtccgctccgcc
tccatccacctcggcaagctccgccgcatcaatgtgctgcaggctaatggcgcgggggcc
aaggaggccgccaaggccgctggcgtcttctggaaacaggagaacgagatgcttcgtcag
gcccgcgcctggcgtctcgaagagctcgacgtcgtccaggacagcgtcaacatggccgat
gtcgcgaccaagaccacgggcatgcccgaacacctgatcgcggagcgccttctgctcgag
atcgcggctcgcgcccgacggttagggctgtaa
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