Brevundimonas sp. NIBR11: KKHFBJBL_02977
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Entry
KKHFBJBL_02977 CDS
T10976
Symbol
ku
Name
(GenBank) Non-homologous end joining protein Ku
KO
K10979
DNA end-binding protein Ku
Organism
bren Brevundimonas sp. NIBR11
Pathway
bren03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bren00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
KKHFBJBL_02977 (ku)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bren03400
]
KKHFBJBL_02977 (ku)
DNA repair and recombination proteins [BR:
bren03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
KKHFBJBL_02977 (ku)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
WGM32723
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All DBs
Position
2984263..2985126
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AA seq
287 aa
AA seq
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MPARPTWQGHLKLSLVTCPVALYTATTKTNDVSFHLINPKTNNRIRMVATDPDTGPVERS
DLVKGYEVSKDEYVLFDNADFDKVKLESTRTIDIDQFVDADDIDRLYWADPLYVVPDKGV
GAEAFAVIREAMAKQNKIAIGSLVLRNRERRIALEVRGRGLVAYTLRSHDEVRDADDYFD
GIPAAKADKDMVDIAARIIGQKDADFDPSKFKDRYDEALKAMIKAKQKGEGVVEAPEPDD
TNVIDLMAALRNSLKGSAGSAKKPAAKKAAPSKKAAAKKPAAKKKAA
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcgcgtccgacctggcaaggccatctcaagctctcgctcgtcacctgtccggtg
gcgctctacacggcgacgacgaagacgaacgacgtctccttccacctgatcaatcccaag
accaacaaccgcattcgcatggtggcgaccgatccggacacggggccggtcgagcggtcg
gatctggtcaagggctatgaggtgtccaaggacgagtatgtcctgttcgacaacgccgac
ttcgacaaggtgaagctggaatcgacgcggaccatcgacatcgaccagttcgtcgacgcc
gacgacatcgatcggctgtactgggccgatcccctctatgtcgtgccggacaagggggtg
ggggccgaggccttcgccgtcatccgcgaggcgatggcgaaacagaacaagatcgccatc
gggtcgctggtgctgcggaaccgcgaacggcgcatcgccctggaggtccggggtcggggg
ctggtcgcctatacgttgcggtcgcatgacgaggtgcgcgacgccgacgactatttcgac
ggcatcccggcggccaaggccgacaaggacatggtggacatcgccgcgcggatcatcggc
cagaaggacgcggacttcgatccatccaaattcaaggaccgctacgacgaggccctgaag
gccatgatcaaggcgaaacagaagggcgaaggcgtggtcgaggcgcccgagcccgacgac
accaatgtcatcgacctgatggcggcgttgaggaacagtctgaagggctcggccgggtcg
gcgaagaagccggccgcgaaaaaggcggcgccgtccaagaaggccgctgccaaaaagcct
gcggcgaagaagaaggcggcttag
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