Brevundimonas sp. NIBR11: KKHFBJBL_03100
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Entry
KKHFBJBL_03100 CDS
T10976
Symbol
rppH_2
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
bren Brevundimonas sp. NIBR11
Pathway
bren03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bren00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KKHFBJBL_03100 (rppH_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bren03019
]
KKHFBJBL_03100 (rppH_2)
Messenger RNA biogenesis [BR:
bren03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KKHFBJBL_03100 (rppH_2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
WGM32845
LinkDB
All DBs
Position
complement(3099769..3100260)
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AA seq
163 aa
AA seq
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MADHPTHRPNVGVVLFNQSGQVWFGHRAGQTSSHSWQFPQGGVDKGEDLEAAARRELEEE
TGVVSADLLGRTEGWIIYDFPEALKAQHKRDGRKPWDGQKQVWFAFRFTGEEAEIRLDQH
EEIEFDAWRWGDLSEACDLIVPFKRAAYEQVVAAFSGFAKAPG
NT seq
492 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccaccccacccaccgccccaacgtcggcgtcgtcctgttcaaccagagcggc
caggtctggttcggccaccgcgcgggccagacaagctcgcattcgtggcagttcccgcaa
ggcggcgtcgacaagggcgaggacctcgaggccgccgcccgccgcgaactggaggaggag
acgggcgtcgtctccgccgacctcctgggacgcaccgaaggctggatcatctacgacttc
cccgaagccctgaaggcccagcacaagcgggacggcaggaaaccctgggacggtcagaaa
caggtctggttcgccttccgcttcaccggcgaggaggccgaaatccgcctcgaccagcac
gaagagatcgagttcgacgcctggcgctggggcgacctctcggaggcctgcgacctgatc
gtcccgttcaagcgcgccgcctacgagcaggttgtggcggccttctccggcttcgctaag
gcgcccggctga
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