Brevibacillus sp. NSP2.1: M655_000230
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Entry
M655_000230 CDS
T11251
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
brep Brevibacillus sp. NSP2.1
Pathway
brep03030
DNA replication
brep03430
Mismatch repair
brep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
brep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M655_000230 (holB)
03430 Mismatch repair
M655_000230 (holB)
03440 Homologous recombination
M655_000230 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brep03032
]
M655_000230 (holB)
03400 DNA repair and recombination proteins [BR:
brep03400
]
M655_000230 (holB)
Enzymes [BR:
brep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M655_000230 (holB)
DNA replication proteins [BR:
brep03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
M655_000230 (holB)
DNA repair and recombination proteins [BR:
brep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
M655_000230 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
AAA_5
DUF2031
AAA_18
Motif
Other DBs
NCBI-ProteinID:
QHZ54223
LinkDB
All DBs
Position
complement(46572..47552)
Genome browser
AA seq
326 aa
AA seq
DB search
MTWTRFSQQPRASELLYHSLLNNRLAHAYLLAGPKGAGKKQMALHLAKSLFCPEREADAC
GACVTCRRIEGGNHPDVLFITPDGASIKIDQIRALQKEMAMRAVESGHKVYIVEHVDKMT
TQASNSLLKFLEEPPAGVLALLLTEHSHSILPTILSRCQIVQFSPLSAEAIAEQLRADGI
TAGMAQVASHITTNVEEAKALSQSESFAQLRNLVIQLSHECKQRNSSALFTIHDMLQKSD
KIKEELPLFLDLLILWLRDILYVQVGRHAHLINSDQQDVLQGQALVWTKAELLHGIDLVM
DTKNRIERNANAQLALERLVLQFQEG
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgacatggacccgtttttcccagcagccacgcgcttcggagctgctgtaccatagcctg
ctcaacaacagactggcgcacgcttatttgctcgccggtccgaagggagcaggcaaaaag
cagatggccctgcatctggcgaagtcccttttttgtccggaaagggaagcggacgcctgc
ggggcctgtgttacatgcaggcggattgaagggggaaaccaccccgatgtgctgtttatt
acaccggacggggcctcaataaaaatcgaccagattcgcgcgctgcaaaaagaaatggcg
atgcgtgcggtagagtccgggcacaaggtgtacatcgttgaacacgtcgacaaaatgacg
acccaggcctccaacagcctgctgaagtttttggaggagccgcccgctggcgtgcttgcc
ttgctgttgacggaacacagccactcgatcctcccgacgattttatcccgatgccaaatc
gttcaattctcgccactttctgccgaagcgatcgccgaacaactccgggcagacggcatt
acagccgggatggcgcaggttgcctcccacattacgacaaatgtggaagaggccaaggca
ctcagccaatcagaatcgtttgcacagctaagaaatctagtgatacaattgagccatgag
tgcaaacagcgtaattcgtctgcgctcttcaccatccatgatatgttgcaaaagagcgac
aaaatcaaagaggaactacccctctttttagatttgctcatcctttggctgcgcgatatc
ctgtatgtgcaagtaggcaggcatgcccatctcattaacagcgaccaacaggatgtgctg
caaggacaagcactggtatggacaaaagctgagctcttgcatgggatagatttggtcatg
gatacgaaaaatcggatagagcgaaacgccaacgcacagttggctcttgagcggttggtt
cttcaattccaggagggataa
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