Brevibacillus sp. NSP2.1: M655_009660
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Entry
M655_009660 CDS
T11251
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
brep Brevibacillus sp. NSP2.1
Brite
KEGG Orthology (KO) [BR:
brep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
brep03016
]
M655_009660
Enzymes [BR:
brep01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
M655_009660
Transfer RNA biogenesis [BR:
brep03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
M655_009660
Prokaryotic type
tRNA splicing ligases
M655_009660
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
QHZ55886
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All DBs
Position
1958874..1960055
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AA seq
393 aa
AA seq
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MKTIDHGNCHREVQLGAGSVHVFANDEVFATFGQRVFEMAEHNLRIPRNVYFSYTPDAHV
GIGTCIGTTAVWNMHDGFVSPSIVGSDIGCGMRVHLTPLHRDELKDKQLKRELIQAIETY
VPTTERGQTSYTDISLEEVVKHGLNGLPAAYLAEPAGEPGGVSRSLTHVEKHTFAFDHAA
LAHIPAKSWQRAWGQLGTLGGGNHFIEIQSLEIAEDNREIAQEWGLFDGQVVIMIHSGSR
AWGAMLGRDYTKSFKEAMFKWGIENPEPSLVYAPIDTEEGKRYLNLMYSALNYAVVNRHL
IGYAVERAFRDVLGKDFSTPVLYDLMHNYALQEYHRNTPMLVHRKGATKALPAGHFQNPK
AYKDVDQIIDSVVGAKLATVVAKCKPLVAIKGV
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgatcgatcacgggaattgccatcgggaagtgcagcttggcgctggctccgtt
cacgtgtttgccaatgacgaagtgtttgccacatttgggcagcgcgtgttcgagatggcg
gaacataacttgcgcatccctcgcaatgtgtacttttcctatacgccggatgcccatgtc
ggaatcgggacgtgcatcgggacgacggccgtctggaatatgcatgacgggtttgtgtcg
ccctcgattgtcggctcggatatcggctgcggcatgcgcgtgcacctgacgccgctgcat
cgggatgagctgaaagacaagcaattgaagcgcgagctgattcaggcgattgaaacgtac
gtgccgacgacggagcgcgggcaaacgagctacaccgatatttccctcgaagaagtggtg
aagcatggcctgaacggcctgcctgccgcgtatttggcggagccggcgggcgagccgggc
ggggtgagccgctccttgactcatgtggaaaagcatacatttgccttcgatcacgcggcg
cttgcgcacatcccggccaagtcgtggcaaagagcgtggggacagctcggcacgctcggc
ggcgggaatcattttatcgaaatccagtcgctcgaaatcgcggaggacaaccgggagatc
gcacaggaatggggcttgttcgacgggcaggtcgtcatcatgattcactccggctcccgc
gcctggggcgccatgctcggacgggattacacgaaaagcttcaaggaagcgatgttcaag
tgggggattgaaaatccggagccgagcctggtctacgccccgattgatacagaggaaggc
aagcgatatttgaacctgatgtactcggccttgaattacgcggtggtgaaccgccatctg
atcggctatgcggtcgagcgggctttccgggacgtgctgggaaaagacttttccacgccg
gtcctgtacgatttgatgcacaattacgccttgcaggaatatcaccgcaacacgccgatg
ctcgtccatcgcaaaggggcgaccaaagcgcttccggctggccacttccaaaatccgaag
gcgtacaaagacgtggatcagattattgattccgtcgtgggggcaaagctggcgacagtc
gtagccaagtgcaagccgctcgtcgcgatcaaaggagtatga
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