Brevibacillus sp. NSP2.1: M655_012020
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Entry
M655_012020 CDS
T11251
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
brep Brevibacillus sp. NSP2.1
Pathway
brep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
brep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M655_012020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brep03019
]
M655_012020
03009 Ribosome biogenesis [BR:
brep03009
]
M655_012020
Enzymes [BR:
brep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
M655_012020
Messenger RNA biogenesis [BR:
brep03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
M655_012020
Ribosome biogenesis [BR:
brep03009
]
Prokaryotic type
rRNA helicases
M655_012020
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
RelE
Motif
Other DBs
NCBI-ProteinID:
QHZ56323
UniProt:
A0A9X7SUQ6
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All DBs
Position
2422036..2423625
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AA seq
529 aa
AA seq
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MTMFSDFPLHKSILQAIHDMGFEEPSPIQAACIPKVLAGGDLIGQAQTGTGKTAAFGIPL
VEKITPANRVQAIVLTPTRELAIQVAGELLRISKYNKVRTLPIYGGQSIGHQIRALRQGV
QIVVGTPGRVMDHLRRKTLKLDHVHTLVLDEADEMLDMGFIEDIETIITHMPEERQTLLF
SATMPPEIKRLATRYMKQPQTIAVSREEVTAPLIEQVYYKVFDRNKVESLCRILDSEDVE
LGIIFCRTKRGVDELSEVLQSRGYLADGLHGDLSQAQRDKVMNAFREGSIEFLIATDVAA
RGIDVGNVSHVINYDIPQDSESYVHRIGRTGRAGRKGIAMTLVTPREVRQMMFIQKQTKA
QVLSRNVPSLEEVAERKQEQLREQLTSLLESDAIADMYQKVAETLVGQYPAEKVAAAALH
LAFHTEAGQIQETEAYNFGETGAAKGMVRFFLNVGRNANMKPQDLVREISESVGIPGKAV
GRIDIFENFTFVEVPEEVAAFVYESLRQTRINGKRINLEPAKPRGAKRS
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgttttctgattttcctttacataaatccattttgcaggcgatccacgatatg
ggcttcgaagagccatcgccgatccaggccgcttgcattccgaaagtgctggctggggga
gacctgatcggccaagcacagacgggaacgggtaagaccgcagctttcgggattccgctc
gtggagaaaattacgccagccaaccgcgtacaggctatcgtgctgactccgacgcgcgag
cttgccatccaggttgccggagagctgctgcgcatctccaaatacaacaaagtacgcacg
ctgccgatctacggcggacagtcgatcggccaccagattcgcgccctgcgccaaggcgtg
cagatcgtagtcgggacgcccggccgcgtcatggaccacctgcgccgcaaaacattgaag
ctcgatcatgtacatacactcgttctggatgaagcggacgaaatgctggacatgggcttc
atcgaagatatcgaaacgatcatcacacatatgccggaagagcgtcagactctgcttttc
tccgcaacgatgccgcctgaaatcaagcgcctggcgacccgctacatgaagcagccgcaa
acgatcgcggtcagccgcgaagaagtgacagcgccattgatcgaacaagtgtattacaaa
gtgtttgaccggaacaaagtagagagcctgtgtcgcattctcgacagcgaggacgtggag
cttggcatcatcttctgccgcaccaagcgcggggtggatgagctgtccgaagtgctgcaa
tctcgcgggtatttggcggacggcttgcacggcgatctttcccaggcgcagcgcgacaag
gtgatgaatgccttccgcgaaggctccatcgagtttttgatcgccaccgacgtagcggcg
cgcgggatcgacgtaggaaacgtatcccacgtcatcaactacgacattccgcaagactcc
gagagctacgtgcaccggatcgggcgtacaggccgcgccggacgcaaaggaatcgccatg
actttggtgactccgcgtgaagttagacagatgatgttcatccagaagcagacaaaagca
caagtgctgtcccgcaacgttccgtcgctggaggaagtggctgagcgcaagcaggagcag
ctccgcgagcagttgaccagcctgctggaaagcgatgcgattgcggatatgtaccaaaaa
gtagcggaaacgctcgttggccaatacccggctgagaaggttgcggctgcggcactgcac
ctggctttccataccgaagcagggcaaattcaggagaccgaagcgtacaacttcggagag
acgggtgcggcaaaaggcatggtgcgtttcttcctgaacgtaggccgcaacgcgaacatg
aagccgcaagatttggttcgcgaaatttccgagtcggtcggcatcccgggcaaagcggtg
ggccgcatcgacattttcgaaaacttcacgtttgtggaagtgccggaggaagtggcggcg
ttcgtctacgaatcgctccgccaaacccggatcaacggcaagcgcatcaacctggagccg
gcgaagccgcgcggtgcgaagcgctcctaa
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