Brevibacillus sp. NSP2.1: M655_017320
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Entry
M655_017320 CDS
T11251
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
brep Brevibacillus sp. NSP2.1
Pathway
brep02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
brep00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
M655_017320 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
brep03021
]
M655_017320 (rpoD)
Transcription machinery [BR:
brep03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
M655_017320 (rpoD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
tify
COPI_C
Motif
Other DBs
NCBI-ProteinID:
QHZ57272
LinkDB
All DBs
Position
complement(3615830..3616957)
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AA seq
375 aa
AA seq
DB search
MNKQNITSDMEAMSIEQVKEQLVELGKKRGVLSYKEITDRLAGFEQDSDQMDEFFEYLGD
QGIEINNNENDDDDEVDEMIMKDEDNEEFDFDDLSVPPGIKINDPVRMYLKEIGRVPLLS
AEEEIKLAQRIEQGDEEAKRRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVE
KFDYRKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVSRQLLQELGRE
PMPEEIAEKMDLTPEKVREIMKIAQEPVSLETPIGEEDDSHLGDFIEDQDALEPSDAAAY
ELLKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRK
LRHPSRSKRLKDFLE
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcaaaatatcacttctgacatggaagcaatgtccatcgaacaagtgaaggag
cagttggtcgaattaggcaagaaacgcggcgttttgtcgtacaaggaaattacggatcgc
ctggcaggtttcgagcaggattcggatcagatggatgagtttttcgaatacctgggcgat
caaggtatcgagatcaacaacaacgagaacgacgacgacgatgaagtcgacgaaatgatt
atgaaggacgaggacaacgaagaattcgactttgacgatctctccgttccgcctggaatt
aagatcaatgaccctgtacggatgtacttgaaagaaattggtcgtgttcctctgctctcc
gctgaagaggagattaaattggcccagcgcattgaacagggtgacgaggaagcgaaaaga
agactggctgaggccaacctgcgactggttgtttcgattgccaagcgctatgtaggccgc
ggcatgctgttcctcgacctgattcaagaagggaacatgggtctgattaaagcggtggaa
aagtttgactaccgcaaaggctacaagttcagtacgtacgcgacatggtggattcgccag
gccattacccgtgcaattgcggaccaggcgcggaccattcggattccggtgcatatggtg
gaaacgatcaacaagctgatacgcgtttccaggcagcttctccaggagctaggacgcgag
ccgatgccagaggaaatcgcggaaaaaatggatttgaccccggaaaaggttcgagaaatc
atgaagattgctcaagagcctgtttctttggagacgccaatcggggaagaagacgactct
cacttgggcgatttcatcgaggaccaggacgcgctggagccttcggatgcagcggcgtat
gagctgttgaaagagcagctcgaagacgttctggacaccttgactgatcgggaagaaaac
gttcttcgcctgcgttttggcctcgacgacggtcgcacgcgcacattggaagaagttggc
aaagtgttcggcgtaacgcgcgagcgcattcgtcagatcgaagcaaaagcgctgcgaaaa
cttcgtcatccaagccgaagcaaacgcttaaaagatttcctggaatag
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