Brevundimonas sp. 'scallop': E4341_00620
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Entry
E4341_00620 CDS
T09204
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
bres
Brevundimonas sp. 'scallop'
Brite
KEGG Orthology (KO) [BR:
bres00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bres03016
]
E4341_00620 (miaB)
Enzymes [BR:
bres01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
E4341_00620 (miaB)
Transfer RNA biogenesis [BR:
bres03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
E4341_00620 (miaB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
DUF3253
Motif
Other DBs
NCBI-ProteinID:
QIF80303
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Position
124418..125938
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AA seq
506 aa
AA seq
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MRRGSIPPMWMRADARLVATLAGDHKPTMTETLVPQVETAPEKRLFIKTYGCQMNVYDSE
RMADVLRPLGYGVTDDVKAADFVILNTCHIREKAAEKIYSELGKLREMRDIRRETGGDLT
IAVAGCVAQAEGEEIMRRQPAVDMVVGPQAYHQLPELLTRTARARGERIGADFAPDDKFD
ALPAARFTEGPTAFLTVQEGCDKFCTFCVVPYTRGAEWSRPMAAVLEEARQLADRGVREV
TLLGQNVNAYDGERPDGRKATLAELAYALAEIPGLDRIRYTTSHPNDMADELIAAHGDLD
ALMPYLHLPVQAGSDRILRAMNRKHGRQKYFDLIDRIRVARPDIAIAGDFIVGFPGETDR
EFEDTLDLVRRVNYAGAFAFAYSPRPGTPAAGMGKQVEPDVAKDRLHRLIALLTEQQTAF
NVAQAGRTLNVLFDKPGRHGHRRQAIGRSPYLQSVHVDDADHLIGQIVPIEIIAGQQNSL
SGRLIADGLRQPGPAGSATAQKEKAA
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgcgggtcgatcccgccgatgtggatgcgggctgacgctcggcttgtcgcgacg
cttgcgggcgatcataagcccacgatgaccgagaccctggttcctcaagtcgagacggcg
cccgaaaagcgtctgttcatcaagacctacggctgtcagatgaacgtctatgatagcgag
cgcatggccgatgtgctgcgcccgctgggttatggcgtcaccgacgacgtgaaggccgcc
gacttcgtcatcctgaacacctgccatatccgcgaaaaggcggccgagaagatctattcc
gagctcggcaagctgcgcgagatgcgcgacatccggcgcgaaaccggcggggatctgacc
atcgccgtcgccggctgcgtcgcccaggccgagggcgaagagatcatgcgtcgccagccg
gccgtcgatatggtcgtcggtccccaggcctatcaccaactgcccgagcttctgacccgc
acggcgagggcgcggggcgagcggatcggcgccgacttcgctcccgacgacaagttcgac
gccctgcccgcggcccgcttcaccgaggggccgaccgccttcctgacggtgcaggagggt
tgcgacaagttctgcaccttctgcgtcgtgccctatacgcgcggcgccgaatggtcgcga
ccgatggcggcggtgttggaagaggcgcgacaactggcggatcggggcgtgcgcgaggtc
accctgctgggccagaacgtcaacgcttatgacggcgagcggccggacgggcgcaaggcg
accctggccgaactggcctatgccctggccgagatccccggcctggaccgcatccgctat
acgaccagccatcccaacgacatggccgatgagttaatcgccgcgcatggcgatctggac
gccttgatgccctatctgcatctgccggttcaggcggggtcggatcgcattttgcgggcg
atgaaccgcaagcacgggcgtcagaaatatttcgatctgatcgaccggatccgcgtcgcg
cggccggatatcgccatcgcgggcgacttcatcgtcggcttccccggtgagacggatcgg
gagttcgaggacacgctggatctggtgcggcgtgtgaactacgctggggccttcgccttt
gcctattcgccgcgaccgggcacgccggcggcgggcatgggcaaacaggtcgagccggac
gtcgccaaggatcgactgcatcgcctgatcgccctgctgacggaacagcagaccgccttc
aatgtggctcaggccggccggacgctgaacgtcctgttcgacaagccgggacggcacggc
caccgtcgccaagcgatcggtcgatccccatatcttcaatcggtccacgtcgatgacgcg
gatcatctgatcgggcagatcgttccgatcgagatcatcgccggccagcagaacagtctg
tcaggccggctcatagcagacgggctcaggcagccgggtcccgcaggctcggcgacagcc
caaaaagaaaaggccgcttga
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