Brevundimonas sp. 'scallop': E4341_00765
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Entry
E4341_00765 CDS
T09204
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bres
Brevundimonas sp. 'scallop'
Pathway
bres03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bres00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E4341_00765 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bres03019
]
E4341_00765 (recQ)
03400 DNA repair and recombination proteins [BR:
bres03400
]
E4341_00765 (recQ)
Enzymes [BR:
bres01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E4341_00765 (recQ)
Messenger RNA biogenesis [BR:
bres03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E4341_00765 (recQ)
DNA repair and recombination proteins [BR:
bres03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
E4341_00765 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
HRDC
RQC
RecQ_Zn_bind
Rhodanese
Motif
Other DBs
NCBI-ProteinID:
QIF80330
LinkDB
All DBs
Position
complement(154154..156031)
Genome browser
AA seq
625 aa
AA seq
DB search
MPATRPQFSSTDTTDLNDARALLARVWGHSDFRGLQGQVVEQILSGGDVLAVLPTGGGKS
VCYQIPAILRPGLGLVVSPLIALMTDQVEALKQQGVAAARLDSGVSLDERSAIWAAARSG
ELDLLYVSPEGLAAGAMMDRLAELPLSLIAIDEAHCVSQWGHDFRPDYRNLGLLAERFPD
VPRIAVTATADARTRYDILRSLRLEEATVFVDSFARPNLQLSAERKESASRAKTDARVIE
LVRERRGKSGVVYCGSRDGCDRVAQALRDAGTNAIAYHAGMDTKERDRRLERFLAEEGAV
MVATIAFGMGVDKADVRFVIHADPPGSLEAYWQEIGRGGRDGEPAEGITLYGPSDIAWSL
RRLDSRPMAEEVKQVQVRKTRQLFAMLDGAVCRAQAVRRYFGEHDAQPCGVCDICGDPPQ
LYDATVPAQKALAAVQRLGGRFGRNRVVDHLTARTKDLQPWEQQLSTWGIGREISLTSWR
EIVDHLLFEGLLAEDPNDGKPLVGLGDPEAVRAVYRGERQIEVRRAPLRADTAPRRRDRS
GEGRNAALETMDADVRARFEALRAWRRDRASEQHVPPYVIFQDRTLLEIAHAEPGDLNSL
GAISGVGQSKLDRYGKGVLEALAAL
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgccggccacgcgcccccagttttcctcgaccgatacgactgacctgaacgacgcgcgg
gcgttgttggcgcgcgtctgggggcactccgacttccgggggctgcaggggcaggtggtc
gagcagatcctgtcgggcggcgatgtgctggcggtcctgccgaccggcggcggcaagagc
gtctgctatcagatcccggccatcctgcgccccggactggggttggtggtgtcgccgctg
atcgccctgatgaccgatcaggtggaggcgttgaagcagcagggcgtcgcggcggcgcgg
ctggattccggggtgtcgctggacgagcgctcggccatctgggcggcggcgcggtcgggg
gagctggacctgctctatgtctcgccggaaggcctggcggcgggggccatgatggaccgg
ctggcggaactgccgctgagcctgatcgccatcgacgaggcccactgtgtgtcccagtgg
ggtcacgacttccgccccgactatcgcaacctgggtctgctggccgagcggttccccgac
gtgccccgcatcgcggtgacggcgaccgccgacgcccgcacgcgctacgacattctgcgc
tcgcttcgactggaagaggcgacggtcttcgtcgatagtttcgcgcgtccgaacctgcaa
ctgtcggccgagcgcaaggagagcgcgtctcgggccaagaccgacgcgcgggtcattgaa
ctggtgcgcgaacggcggggcaagtcgggcgtggtctattgcggcagccgcgacggctgc
gaccgcgtggcccaggcgctgcgcgacgccgggaccaacgccatcgcctatcacgccggc
atggatacgaaggagcgcgaccgccggctggaacgcttcctggccgaggagggcgccgtc
atggtcgcgaccatcgccttcggcatgggcgtcgacaaggccgatgtccgcttcgtcatc
cacgccgatccgcccggttcgctggaggcctattggcaggagatcgggcgcggcggtcgc
gacggcgaaccggccgagggcatcaccctgtatggcccgtccgacatcgcctggtccttg
cgtcggctggacagccgcccgatggccgaggaggtcaaacaggtccaggtcaggaagacc
cgtcagctgttcgccatgctggacggcgccgtctgccgcgcccaggccgtgcggcgatat
ttcggcgagcatgacgcccagccttgcggcgtctgcgacatctgcggcgacccgccccag
ctctatgacgcgaccgtcccggcccagaaggcgttggcggcggtgcagcgcttgggcggc
cggttcgggcgcaaccgcgtcgtcgatcatctgaccgcccgcaccaaggacttgcagccg
tgggagcagcaactgtccacctggggcatcgggcgcgagatttcgctgaccagctggcgc
gagatcgtcgatcatttgctgttcgaaggtctgctggccgaggatcctaacgacggcaag
ccgctggtcgggctgggcgatcccgaagcggtgcgcgccgtctatcgcggcgagcgccag
atcgaggtgcgtcgcgcgcctctgagggccgatacggccccgcgccgtcgtgaccgatcg
ggcgaagggcgcaatgcggcgctggagacgatggacgcggacgtccgcgcccggttcgag
gccttgcgcgcctggcgccgcgaccgcgcctcggaacagcacgtcccgccctatgtcatc
ttccaggaccggacgctgctggagatcgcccacgccgagccgggcgacctgaacagtctg
ggcgccatttccggcgtcggtcagtcgaagctggatcgctacggcaagggcgtgctggag
gcgctggccgctctctag
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