Brevundimonas sp. 'scallop': E4341_01005
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Entry
E4341_01005 CDS
T09204
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
bres
Brevundimonas sp. 'scallop'
Pathway
bres00020
Citrate cycle (TCA cycle)
bres00640
Propanoate metabolism
bres00660
C5-Branched dibasic acid metabolism
bres00720
Other carbon fixation pathways
bres01100
Metabolic pathways
bres01110
Biosynthesis of secondary metabolites
bres01120
Microbial metabolism in diverse environments
bres01200
Carbon metabolism
Module
bres_M00009
Citrate cycle (TCA cycle, Krebs cycle)
bres_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
bres00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
E4341_01005 (sucD)
00640 Propanoate metabolism
E4341_01005 (sucD)
00660 C5-Branched dibasic acid metabolism
E4341_01005 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
E4341_01005 (sucD)
Enzymes [BR:
bres01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
E4341_01005 (sucD)
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Gene cluster
GFIT
Motif
Pfam:
Ligase_CoA
CoA_binding
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
QIF80376
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All DBs
Position
complement(206861..207763)
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AA seq
300 aa
AA seq
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MSILVDKNTKIIVQGLTGKTGGFHTEQALAYHGTQMVAGVHPSKGGTNWTGSHGESLPIY
ASVAEAKDATGADASVIYVPPSGAAAAIIEAIDAEIPFITCITEGIPVMDMVKVKRRLEG
SKSRLLGPNCPGILTPDECKIGIMPGNIFKKGSVGIVSRSGTLTYEAVFQTTNEGLGQTT
AVGIGGDPVKGTEFIDVLELFLADEETTSIIMIGEIGGGAEEDAAQFLIDEAKKGRKKPM
AGFIAGRTAPKGRTMGHAGAVVSGGKGDAESKIAAMEAAGIRMSESPARLGKTLVEVLKG
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtccattctcgtcgacaagaacaccaagatcatcgtccagggcctgaccggcaagacc
ggcggcttccacaccgaacaggcgctggcctatcacggcacccagatggtcgccggcgtg
cacccctccaagggcggcacgaactggaccggatcgcacggtgagagcctgccgatctac
gcctcggtcgctgaagccaaggacgccacgggcgccgacgcctcggtgatctacgtcccg
ccgtcgggcgcggccgccgcgatcatcgaagccatcgacgccgaaatccctttcattacc
tgcatcaccgagggcatcccggtgatggacatggtcaaggtcaagcgtcgcctggaaggc
tccaagtcgcgcctgctggggccgaactgccccggtatcctgacgccggacgagtgcaag
atcggcatcatgccgggcaacatcttcaagaagggctcggtcggcatcgtgtcgcgttcg
ggcaccctgacctatgaagccgtgttccagaccaccaacgaaggtcttggccagaccacg
gccgtcggcatcggcggcgacccggtcaagggcaccgagttcatcgacgtgctggagctg
ttcctggccgacgaggaaaccacctcgatcatcatgatcggcgaaatcggcggcggtgcg
gaagaagacgccgcccagttcctgatcgacgaagccaagaagggtcgcaagaagccgatg
gccggcttcatcgcgggccgcacggctccgaagggccgcaccatgggccacgccggcgcc
gtcgtctcgggcggcaagggcgacgccgaatccaagatcgcggcgatggaagccgccggc
atccgcatgtcggaatcgcccgcgcgcctcggcaagaccctggtcgaagtcctgaagggt
taa
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