Brevundimonas sp. 'scallop': E4341_01555
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Entry
E4341_01555 CDS
T09204
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bres
Brevundimonas sp. 'scallop'
Pathway
bres03030
DNA replication
bres03410
Base excision repair
bres03420
Nucleotide excision repair
bres03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bres00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E4341_01555 (polA)
03410 Base excision repair
E4341_01555 (polA)
03420 Nucleotide excision repair
E4341_01555 (polA)
03440 Homologous recombination
E4341_01555 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bres03032
]
E4341_01555 (polA)
03400 DNA repair and recombination proteins [BR:
bres03400
]
E4341_01555 (polA)
Enzymes [BR:
bres01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E4341_01555 (polA)
DNA replication proteins [BR:
bres03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
E4341_01555 (polA)
DNA repair and recombination proteins [BR:
bres03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
E4341_01555 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E4341_01555 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Taq-exonuc
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
QIF80470
LinkDB
All DBs
Position
complement(321697..324609)
Genome browser
AA seq
970 aa
AA seq
DB search
MTETTAPKNPETERQMTQDGPALRLWMIDASAYIFRAYHALPPLTRKSDGLPVGAVQGYC
NMLWKLLKDMKGADGPTHLVAIFDHSEKTFRNTLYDQYKAHRPPPPEDLVPQFPLVREAT
AAFGVHCVELPGYEADDLIATYACKARDAGGEAVIVSSDKDLMQLIGGGVVMWDPMKDRR
LAEPEVFEKFGVGPEKMVDLQALIGDSVDNVPGAPGIGPKTAAQLLDEYGNLDTLLASAG
EIKQPKRRQTLIDFADQIRLSRELVRLTCDAPAPEAIDDFAVRDPDPAILSAFLETMEFR
SLQRRVGDGKAGPSDVSAFAPKRAPNLNAPVATPRYGQVVEGPVEVQTFDHAAYECVQTE
EALDRWIARATEVGVVGFDTETDTLSATHAGLCGVSLAVGPNEACYIPLTHEHEPQAGEG
GLFGEAGEVPEPIHQLDKPTTLAKLKTLLEDPSVLKVLQNAKYDIAVMARRGIRVAPYDD
TMLISYVLEGGLHGHGMDELARLHLGHEPIAFKSVAGTGKSQKSFKHVALKPASEYAAED
ADVTLRLWRILKPRLAREGLSTVYETLERGMPTVLADMELNGVRIDPDRLKRLSSEFGLR
MAELEAQAHEIAGRPFNIGSPRQIGEILFGELNLPGGKKTASGQWGTDASVLEELALSHD
LPRAILDWRQLSKLKGTYTDALTAAADPKTDRVHTSYQLAAATTGRLASSDPNLQNIPIR
TETGREIRQAFIAAPGNVLISADYSQIELRLLAHIGDIPELKRAFKAGLDIHAATASEMF
GVPVEGMPSETRRRAKAINFGIVYGISAFGLANQLGIDQGEAGAYIKTYFERFPGIRAYM
DKTKAEVRQTGFVSTVFGRRIHIPAIHSKSGAERQFGERAAINAPIQGAAADIIRRAMIR
MPAALTEAGLATKMLLQVHDELVFEAPEAEADRAIAVIKRVMENASDPAVVLTVPLVVDA
RAASNWDAAH
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagacgactgcgcccaaaaatccagaaactgaacgccagatgacgcaggacggc
cctgcgctgcgtctgtggatgatcgacgcctcggcctatatctttcgcgcctatcacgcc
ctgccgccattaacgagaaagtccgacggcctgccggtcggcgcggtccagggctactgc
aacatgttgtggaagctgctgaaggacatgaagggcgccgatggccccacccatctggtg
gccatcttcgaccattcggaaaagacgttccgcaacaccctgtacgatcagtacaaggcc
catcgtccaccgccgcccgaggatctggtcccgcagtttccgctggtgcgcgaagcgacg
gcggcgttcggcgtccattgcgtcgaactgcccgggtacgaggccgacgacctgatcgcg
acctacgcctgcaaggcgcgcgatgcgggcggggaggcggtgatcgtctcgtccgacaag
gatttgatgcaactgatcggcggcggcgtcgtgatgtgggatccaatgaaggaccggcgt
ctggccgagcctgaggtcttcgaaaagttcggcgtcggccccgagaagatggtcgatctg
caggccctgatcggcgacagcgtggacaatgtccccggcgcgccaggcatcggaccgaag
acggcggcgcagctgctggacgaatacggcaatctggacaccctgttggccagcgccggt
gagatcaaacagcccaagcgccgccagactctcatcgacttcgccgaccagatccggctg
tcgcgcgagctggtgcgcctgacctgcgatgcgccggcgcccgaggcgattgacgatttc
gccgtgcgcgatcccgatcccgcgatcctgtcggcctttctggagacgatggagttccgc
tcgctgcagcgccgcgtcggcgacggcaaggcgggacccagcgacgtctccgcctttgcg
cccaagcgtgcgccgaacctgaacgcgccggtcgcgacccctcgctacggccaggtcgtc
gaaggcccggtcgaggtccagaccttcgatcacgcggcctatgaatgcgtccagaccgaa
gaggccctggatcgctggatcgcgcgcgcgaccgaggtcggcgtcgtcggcttcgacacc
gagaccgatacgctgtcggcgacccatgcgggactgtgcggcgtgtcgttggcggtgggg
ccgaacgaggcctgctacatccccctgacgcatgagcacgagccgcaggccggcgagggc
ggtctctttggcgaagcgggagaggtgcccgagccgatccatcagctggacaagcccacg
accctggccaagctgaagacgttgctggaagacccgtcggtcttgaaggtgcttcagaac
gccaaatacgacatcgccgtcatggcgcgtcgaggcatccgcgtcgcgccttatgacgac
accatgctgatctcctatgtgctagagggcggactgcacgggcacggaatggacgagctg
gcgcgcctgcacctgggccacgagccgatcgcattcaagagcgtggcgggtacgggcaag
agccagaaatccttcaagcacgtcgcgctgaaaccggcctcggaatatgccgccgaggat
gcggatgtgacgctgcggctgtggcgtatcctgaaaccccgtctggcgcgggagggcctg
tccaccgtctatgagacgctggagcgcggcatgccgacggtgctggcggacatggagctg
aacggggtccgcatcgatcccgaccggctgaagcgtctgtccagcgagttcggcctgcgc
atggccgagctggaggcccaggcccatgagatcgcagggcgccccttcaacatcggctcg
ccgcgccagatcggcgagatcctgttcggcgaactgaacctgccgggcggcaagaagacc
gcctcgggtcagtggggcaccgacgccagcgtgctggaggaactggcgctcagccacgat
ctgccgcgcgcgatcctggactggcgccagctgtccaagctgaagggcacatacacggac
gccttgaccgcggccgccgatcccaagacggaccgcgttcacaccagctatcaactggcc
gccgccaccacgggccgcctggcgtccagcgatcccaacctgcagaacatcccgatccgc
accgagacgggccgcgagatccgccaggccttcatcgccgcgcccggcaatgtcctgatc
agcgccgactacagccagatcgagctgcgccttttggcccatatcggcgacatccccgag
ctgaagcgcgccttcaaggccggtttggacattcacgccgccacggcctcggagatgttc
ggcgtccccgtcgagggcatgccgtccgaaacccgtcgccgggccaaggccatcaacttc
ggcatcgtctacggcatctcggccttcggcctcgccaaccagctgggcatcgatcagggc
gaggcgggggcctatatcaagacctatttcgaacgcttccccggcatccgcgcctatatg
gacaagaccaaggccgaggtgcgccagacgggcttcgtctcgaccgtcttcggccgccgc
atccacatccccgccatccactcgaagtcgggcgccgaacgccagttcggcgagcgcgcc
gccatcaacgccccgatccagggcgccgccgccgacatcatccgccgcgccatgatccgc
atgcccgctgccctgaccgaggccggtctggcgacgaagatgctgctccaggtccacgac
gaactggtgttcgaggcgccggaagccgaggccgaccgcgccatcgccgtcatcaaacgc
gtgatggaaaacgcgtcggacccagccgtggtcctgaccgtacccctcgtagtggatgcc
cgcgcggcgtcgaactgggacgcggcgcactga
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