Brevundimonas sp. 'scallop': E4341_01705
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Entry
E4341_01705 CDS
T09204
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bres
Brevundimonas sp. 'scallop'
Pathway
bres03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bres00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E4341_01705 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bres03021
]
E4341_01705 (rho)
03019 Messenger RNA biogenesis [BR:
bres03019
]
E4341_01705 (rho)
Transcription machinery [BR:
bres03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
E4341_01705 (rho)
Messenger RNA biogenesis [BR:
bres03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
E4341_01705 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_22
ATPase_2
OB_RNB
NACHT
S1CSD-TOTE-2
AAA
AAA_14
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QIF80498
LinkDB
All DBs
Position
complement(349811..351244)
Genome browser
AA seq
477 aa
AA seq
DB search
MTDVRDTNPETPENEGVEVEAPTHHGAAHEAGEAAGADSGVDTTADDEEDGDPVVANGRI
TLAELNEKTPADLVAFAEQLEVENASNLRKQDLLFAILKALADEEVEIIADGVLEILPDG
FGFLRSSDANYLPGPDDVYVSPSQIRRFGLRSGDTVHGAVRAPREGERYFALLKVDTINL
EDPEAVKTKVLFDNLTPLYPEERLHMEIQDPTLKDRSGRVIDIVAPLGKGQRCLIVAPPR
VGKTVMLQNIAKSIERNHPEVFLIVLLIDERPEEVTDMQRTVKGEVVASTFDEPATRHVA
VAEMVIEKAKRLVEHKKDVVILLDSITRLGRAYNATVPSSGKVLTGGVDANALQRPKRFF
GAARNVEQGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPAIDVL
KSGTRKEDLITPKDQLAKTYVLRRILNPMGPQDAIEFLLDKLRQSKNNSDFFQSMNT
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgtccgcgacaccaatcccgagacccccgagaacgaaggtgtggaggttgaa
gcccccacccatcacggcgcggcgcatgaagcgggcgaggcggcgggcgccgattccggc
gtggacacgacggcggatgacgaagaggacggtgatcccgtcgtcgccaacggccgaatc
acgctcgccgaactgaacgagaagaccccggccgacctggtcgccttcgctgaacagctg
gaggtcgagaacgcctcgaacctgcgcaaacaggatctgctgttcgccatcctgaaggcc
ctcgctgacgaagaagtcgagatcatcgccgacggcgtactggaaatcctgccggacggc
ttcggcttcctgcgcagctcggacgccaactatctgccgggtccggacgacgtctatgtc
tcgccgtcgcagatccgccgcttcggcctgcgctcgggcgacaccgtccatggggccgtg
cgggcgccgcgcgaaggcgaacgctacttcgccctgctcaaggtcgatacgatcaatctc
gaagaccccgaagcggtcaagaccaaggtcctgttcgacaacctgacgccgctctatccc
gaagagcgactgcacatggaaatccaggatccgacgctgaaggatcggtcgggtcgggtc
atcgatatcgtcgcgcccttgggcaagggccaacgctgcctgatcgtggcgccgccgcgc
gtcggtaagacagtgatgctgcagaacatcgccaaatcgatcgaacgcaaccacccggaa
gtcttcctgatcgtcctgctgatcgacgaacgccccgaagaagtgaccgacatgcagcgc
acggtgaagggtgaggtcgtcgcctcgaccttcgacgagcccgccacccgccacgtcgcc
gtcgccgaaatggtgatcgaaaaggccaagcgtttggtcgaacacaagaaggatgtggtg
atcctgctggactccatcacgcgtctgggccgagcgtacaacgccaccgtcccctcgtcg
ggcaaggtgctgacgggcggtgtggacgccaacgccctgcaacggcctaagcgcttcttc
ggcgccgcgcgtaatgtggagcagggcggttcgctgaccatcatcgccacggccctgatc
gacaccggcagccggatggacgaggtgatcttcgaagagttcaagggcaccggcaactcg
gaaatcgtgctggaccgcaaggtcgcagacaagcgcatcttccccgccatcgacgtgctg
aagtccggcacccgcaaggaagacctgatcacgccgaaggatcaattggccaagacctat
gtcctgcgccgcatcctgaatccgatgggtccgcaggacgcgatcgagttcctgctcgac
aagctgcgtcagtccaagaacaactcggacttcttccagtcgatgaacacctga
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