Brevundimonas sp. 'scallop': E4341_02035
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Entry
E4341_02035 CDS
T09204
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bres
Brevundimonas sp. 'scallop'
Pathway
bres03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bres00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E4341_02035 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bres03019
]
E4341_02035 (pnp)
03016 Transfer RNA biogenesis [BR:
bres03016
]
E4341_02035 (pnp)
Enzymes [BR:
bres01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
E4341_02035 (pnp)
Messenger RNA biogenesis [BR:
bres03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
E4341_02035 (pnp)
Transfer RNA biogenesis [BR:
bres03016
]
Prokaryotic type
tRNA degradation factors
E4341_02035 (pnp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
S1_RRP5
OB_PDCD11
Motif
Other DBs
NCBI-ProteinID:
QIF80558
LinkDB
All DBs
Position
complement(418663..420897)
Genome browser
AA seq
744 aa
AA seq
DB search
MFDIKRKTIDWAGRPLTLETGRIARQADGAVLATYGETVVLATVVYGRAPKPGLDFFPLT
VNYQEKTFAAGKIPGGYFKREGRPSEKETLVSRLIDRPIRPLFVKGFKNETQVVVTVLQH
DMENDPDVLGMVAASAALTISGVPFMGPIGAARVGLIDGELVLNPAIDLIPSSDLDLVVA
GTQDALMMVESEAKELSEEKMLEALMFAHAGMQPVIDAIIELAEHAAKEPFDFQAEDHSD
VVASIKSLVGEDIKSAYTHAGKYERRSGVDAAKKAAAAKLVKTDENPDGVDGSKFSAAFK
ECEAEVLRRDIIENAHRVDGRALDKVRAIVSEVGVLPRTHGSALFTRGETQALVVATLGT
GEDEQYIDSLQGTYKENFLLHYNFPPYSVGEAGRMGSPGRREIGHGKLAWRAIRPMLPTK
EDFPYTIRLVSEITESNGSSSMATVCGSSLALMDAGVPLVRPVSGIAMGLILEPSGEFAI
LSDILGDEDHLGDMDFKVAGTSEGITSLQMDIKVAGITKEIMKQALTQASAGRLHILDEM
SKAMDAPRAELGEHAPKIETVKIPVDKIREVIGSGGKVIREIVEKTGAKIDIGDDGTIKV
AANDQEKIDAAKAWIQSIASEPEVGTIYSGKVVKVVDFGAFVNFFGAKDGLVHVSQIALE
RVANPADVLSEGQEVKVKFLGFDDRGKTKLSMKVVDQATGEDLTAKINAERAERGEEPLS
EDTGGRPKRDGGDRGGDRGRRRRD
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacatcaaacgcaagacgatcgactgggccggccgcccgctgaccctggaaacg
ggccgcatcgcccgccaggccgacggcgccgtgctggcgacctacggcgagaccgtggtt
ctggccaccgtcgtctacggccgcgcacccaagcccggcctggatttcttccccctgacg
gtcaactatcaggaaaagacctttgccgccggcaagatcccaggcggctacttcaagcgt
gaaggccgtccgtccgagaaggaaaccctggtttcccgcctgatcgaccgtccgatccgc
ccgctgttcgtcaagggcttcaagaacgagacccaggtcgtcgtgaccgtgctgcagcac
gacatggaaaacgatcccgacgttctgggcatggtcgccgcctcggccgccctgaccatt
tcgggcgtgcccttcatgggccccatcggcgccgcgcgcgtcggcctgatcgacggcgag
ctggtgctgaaccccgccatcgacctgatcccgtcctcggacctcgacctggtggtcgcc
ggcacgcaagacgccctgatgatggtcgaatccgaagccaaggagctgtcggaagagaag
atgctcgaggccctgatgttcgcgcatgcgggcatgcagccggtgatcgacgccatcatc
gaactggctgaacacgccgccaaggagcccttcgacttccaggccgaagaccactccgac
gttgtcgcctcgatcaagtctctggtcggcgaagacatcaagagcgcctacacccacgcc
ggcaaatacgagcgccgttcgggcgtcgacgccgccaagaaggccgccgccgccaagctg
gtgaagaccgacgagaaccccgacggcgtcgacggttccaagttctcggccgccttcaag
gagtgcgaagccgaagtcctgcgtcgcgacatcatcgagaacgcgcaccgcgtcgacggc
cgcgccctcgacaaggtccgcgccatcgtgtcggaagtcggcgtcctgccgcgcacccac
ggttcggccctgttcacgcgtggggaaacccaggccctggtcgtcgccaccctcggcacc
ggcgaggacgagcagtacatcgacagcctgcagggcacctacaaagagaacttcctgctg
cactacaacttccccccctattcggtgggtgaagcgggccgcatgggttcgcccggccgt
cgcgaaatcggtcacggcaagctggcctggcgcgcgatccgtccgatgctgccgaccaag
gaagacttcccctacaccatccgtctggtctccgagatcaccgagtcgaacggctcgtcc
tcgatggccacggtctgcggttcgtcgctggccctgatggacgccggcgtgccgctggtc
cgtccggtctcgggcatcgccatgggcctgatcctggagccgtcgggcgagttcgccatc
ctgtcggacatcctgggtgacgaagaccacctgggcgacatggacttcaaggtcgccggc
acgtcggaaggcatcaccagccttcagatggacatcaaggtcgctggcatcaccaaggag
atcatgaagcaggccctgacccaggcttcggccggtcgcctgcacatcctggacgagatg
tccaaggccatggatgcgccgcgcgccgaactgggtgaacacgcgcccaagatcgaaacg
gtcaagatccccgtcgacaagatccgtgaagtcatcggttcgggcggcaaggtcatccgc
gagatcgtcgagaagaccggcgccaagatcgacatcggcgatgacggcaccatcaaggtc
gccgccaacgaccaggagaagatcgacgccgccaaggcctggatccagtccatcgcctcg
gagccggaagtcggaaccatctactccggcaaggtcgtcaaggtcgtcgatttcggcgcc
ttcgtgaacttcttcggcgccaaggacggcctggtccacgtgtcccagatcgctttggaa
cgcgtcgccaatccggccgacgtcctgtcggaaggccaagaggtcaaggtcaagttcctg
ggcttcgacgatcgcggcaagaccaagctgtcgatgaaggtcgtcgatcaggccacgggc
gaagacctgacggccaagatcaacgccgagcgcgccgagcgcggcgaagagcccctgtcg
gaagacaccggcggtcgtccgaaacgtgacggcggggatcgcggtggcgatcgcggacgt
cgtcgtcgcgactaa
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