Brevundimonas sp. 'scallop': E4341_02045
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Entry
E4341_02045 CDS
T09204
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bres
Brevundimonas sp. 'scallop'
Brite
KEGG Orthology (KO) [BR:
bres00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bres03016
]
E4341_02045 (truB)
Enzymes [BR:
bres01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
E4341_02045 (truB)
Transfer RNA biogenesis [BR:
bres03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
E4341_02045 (truB)
Prokaryotic type
E4341_02045 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QIF80560
LinkDB
All DBs
Position
complement(421545..422474)
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AA seq
309 aa
AA seq
DB search
MGRKKKGDIVDGWVCLDKPFEMGSTEAVSRIRRLFNAQKAGHAGTLDPLASGILPIALGE
ATKTVPMMMEAQKVYRFTINWGVSTDSVDREGEIIGRSDVRPTVDQVKAALPAFVGEIDQ
TPPRFSAIKVDGARAYDLARDGVEFELQARRVTIHSAEVTDAPDADHVELTIRTGKGVYV
RSLARDLAAALGAEGHVSALRRECVGPFSTQNAVTLDSLEEMVHRGAASEGLLAVATALD
DIPELAVNEQDAFSLRQGRPIVLLPRQVETLKDRLTGGSRTVSAFQGQTLVALCQLRAGR
LEPDRVFNL
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgggacgcaagaagaagggcgatatcgtcgacggttgggtctgcctggacaagccgttc
gagatgggatcgaccgaggccgtcagccgcatccgtcgcctgttcaacgcccagaaggcc
ggtcacgccggaacgctcgacccgctggccagcggcatcctgcccatcgcgctcggcgag
gcgaccaagaccgtgccgatgatgatggaggcgcagaaggtctatcgcttcaccatcaac
tggggcgtctcgaccgacagcgtggaccgcgagggcgagatcatcggccgctccgacgtg
cgcccgaccgtcgatcaggttaaggctgccctgccggccttcgtcggcgagatcgaccag
acgccgccgcgcttttccgcgatcaaggtggacggcgcccgcgcctatgacctggcccgc
gacggggtggagttcgagcttcaggcccgccgggtgacgatccactcggccgaggtgacg
gatgcgcccgacgccgaccacgtcgaactgaccatccgcaccggcaagggcgtctatgtc
cgctcgctggcccgcgacctggccgccgccctcggcgccgagggtcatgtcagcgccctg
agacgcgagtgcgtcgggccgttcagcacgcaaaacgccgtcactctggattctctggag
gaaatggtgcataggggcgccgcctcggaaggcttgcttgccgtcgcgaccgctctggac
gacatcccggaactggccgtgaatgaacaggacgccttctcgcttcggcagggacgcccg
atcgttctgctcccccgtcaggtggaaaccctcaaggatcgtctcaccggcggttcgcgc
acggtttcagcctttcagggccagaccctcgtcgctctgtgtcagttgcgggccggccgg
ctagaacccgaccgcgttttcaacctctag
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