Brevundimonas sp. 'scallop': E4341_02605
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Entry
E4341_02605 CDS
T09204
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
bres
Brevundimonas sp. 'scallop'
Brite
KEGG Orthology (KO) [BR:
bres00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bres03400
]
E4341_02605
Enzymes [BR:
bres01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
E4341_02605
DNA repair and recombination proteins [BR:
bres03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
E4341_02605
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
DbpA
Motif
Other DBs
NCBI-ProteinID:
QIF80659
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Position
543296..544834
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AA seq
512 aa
AA seq
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MSVLRLVLGDQLSDDLSALKDLNPDVDTVLMVEVRDEATYVRHHKQKLALVFAAMRNHAE
RLKGRGVNVRYVRIDDADNSGSITGELARALEDGVHEAVVTTECGEWRLAEHLAAFAEGA
GLPVEIREDRRFISSHDRFRRWASGKSQLRMEFFYREMRRATGILMDGDQPEGGRWNYDA
ENRKKLAKGVTPPDRLRIQPNAVAREAMADVERLFGDHFGSLDGFGWATTAEEAEASLKH
FLKDVLPSFGDWQDAMAEGQPWMWHGLISTSINLGLLDPLDVCKRAEAVYRAGKAPLNAV
EGFIRQILGWREFVRGIYWLKAPEYRARNFLDADRKLPWFYWSGETDMACVADVVKTTRD
NAYAHHIQRLMVTGNLALLLGVHPDQVDDWYMCVYADAYEWVEMPNTRGMALFADGGIVG
SKPYAASGAYIDRMSDYCGACRYDAKSKSGDAACPFNRLYWGFLERNRGRLRDNVRLAMP
YRTLEKFGEAKRKALAAEAEACRTLLGATPID
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtgcttaggctggtgctgggcgatcagctgtcggacgacctgtcggcgctgaaa
gatctgaacccagacgtcgacacggttctgatggtcgaggttcgcgacgaggcgacctat
gtccggcatcacaagcagaagctggccctagtcttcgccgccatgcgcaatcacgccgag
cggctgaaggggcggggcgtcaatgtgcgctatgttcggatcgacgatgcggacaacagc
ggctcgatcaccggcgaactggcccgggcgctggaggatggcgtccatgaggcggtggtg
acgaccgaatgcggcgagtggcgactggccgagcatctggccgcctttgcggaaggggcg
gggctgccggtcgagattcgcgaggatcgccgcttcatcagcagccacgaccgctttcgc
cggtgggcctcgggcaagtcgcagctgcgcatggagttcttctatcgcgagatgcgccgc
gcgacgggcatactgatggacggcgatcagccggagggcgggcgctggaactatgacgcc
gagaaccgcaagaagctggccaagggcgtgacgccgcccgatcgcctgcgcatccagccc
aacgccgtggcgcgcgaggcgatggcggatgtggagcggctgttcggcgaccatttcgga
tcgctggacgggttcggctgggccacgacggcggaggaggcggaagcctcgctgaagcac
ttcctgaaggacgtcctgccgtcgttcggggactggcaggatgcgatggcggaaggtcag
ccgtggatgtggcatgggctgatctcgacctcgatcaacctgggcctgctggacccgctg
gacgtctgtaagcgcgccgaggcggtctatcgggcgggcaaggcgcccctgaacgcggtc
gaaggcttcatccggcaaatcctgggatggcgcgagttcgtgcgcggcatctactggttg
aaggcgccggagtatcgggcgcgcaacttcctggatgcggaccgcaagctgccctggttc
tactggtccggtgagaccgacatggcctgtgtcgccgacgtggtgaagaccacgcgcgac
aacgcctacgcccaccatatccagcggctgatggtgacgggcaatctggccttgctgctg
ggcgtgcatcccgatcaggtcgatgactggtacatgtgcgtctatgccgacgcctatgaa
tgggtcgagatgcccaatacgcgcggcatggccctgttcgccgacggcggcatcgtgggg
tccaaaccctatgcagcctcgggcgcctacatcgaccggatgagcgattattgcggggcg
tgtcgctatgacgcgaagagcaagagcggcgatgcggcctgtccgttcaaccggctgtac
tggggctttctggagcgcaatcgcggccggctgcgggacaatgtgcggctggccatgccc
tatcgcacgctggagaagttcggagaggccaagcgcaaggccttggcggccgaggcggag
gcgtgccggaccctgctgggcgcgacgccgatcgattga
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