Brevundimonas sp. 'scallop': E4341_03740
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Entry
E4341_03740 CDS
T09204
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
bres
Brevundimonas sp. 'scallop'
Brite
KEGG Orthology (KO) [BR:
bres00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bres03400
]
E4341_03740 (addB)
Enzymes [BR:
bres01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E4341_03740 (addB)
DNA repair and recombination proteins [BR:
bres03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
E4341_03740 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QIF80867
LinkDB
All DBs
Position
complement(762647..765712)
Genome browser
AA seq
1021 aa
AA seq
DB search
MSLFDPFLGDTPRWYAIPAHRPFLEDLAAGVLAWLGDLPPETLSDATILLPNRRAARAFT
GALSKLSQGRPILLPQVRPLGDLEEDEPPFTPGALGLDLPPAIPALTRRFEMARMIVEQF
DASLSPMRALDLADALGGFLDSCQLEEIQNPERIATLVDGEMAEHWERSAEFLGLAVEAW
PKRLAELGLVDPAWRRATLLRRLAELWDREPPRQPVIAAGSTGTVPAAGDVLKAVARAPL
GCVVLPGLDLDLDAGVWNQLDEQHPQSAMKRLLDRCEIARESVRPWFRPAVPPAREARGL
ARQRLVNEALRPAEATDDWRRAIRDIRLAAVARKEARDPIAEGLQGLSHLSVRAEEEAAA
AIALMMRETLETPGKTCALITPDQALGRRVTARLERWGVIPDSSAGAPLSRLPAGALIDL
CARWIADPVQPHLLLAVVKHPLVRFDLGDTFQAAAVVALEEHALRGPRPRDFAAIHRRLL
EAVQPDRRGKAPPEWKQARLSAATRLVDQLQAAIEAATAVFAPDADLDVAASALTRLIET
LAGQNAWAGPDGEAAAALLSGLIEGGASLGRIRRAELAELVTSLVKENVVRTGGATHPSL
RILGAIEARLVRADRMILAGLEEGVWPQAAPTDPFLSRPMRKALGLPPPERRLGQTAQDF
VQAACADEVILIHSERRGGQPAVRSRWLWRLEMLTRGANAVETPVAIARPAAVIDWARAL
DAPPPGPPQFAKRPEPRPPVHRRPRSLFVTRIERWVRDPYAIYALWVLGLEAMERPGASA
EALARGNAVHAAIERLTLDWPNDLPDDCEAILHDHLLRELGARGFEDAAMAREAPLARNC
ARWLTEFERRRRARGVDIMVEQQGTMTFDAPAGPFTVKAFADRIELASDGAAVMDFKTGA
APSAKQVKSGFAPQLTLTAAILADGGFKDTNGPVTPDELTYVRVVGRKTAGEVVTRASGS
EAADLAQAALDGLKRRVARFDNENTPYVSWAAPQFMGNQGGNYDHLARVWEWSVIGDGDE
E
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
gtgagcctgttcgatcccttcctgggcgacacgccgcgctggtatgccatccccgcgcac
cggccattccttgaggatttagccgccggggtgctggcctggctgggcgatctgccgccc
gaaaccctgtcggacgcgaccatcctgctgcccaaccgccgggccgcgcgcgccttcacc
ggcgccctgtccaagctgtcgcagggtcgccccatcctgctgcctcaggtgcggccgctg
ggcgatcttgaggaggacgagccgccgtttacgcccggcgccctgggtctggacctgccg
cccgccatccccgccctgacgcgccggttcgagatggcgcggatgatcgtcgaacagttc
gatgcatccctgagcccgatgcgtgcattggacctcgccgacgcgctgggcggcttcctc
gattcctgccaactggaagagattcagaaccccgagcggatcgccacattggtcgacggc
gaaatggccgaacactgggaacggtcggccgagtttctgggtctggcggtcgaggcctgg
cccaagcgtctggccgaactgggtttggtcgatccggcctggcgtcgcgcgaccctgctg
cgccgcctcgccgagctgtgggaccgcgagccgccgcgccagcccgtcatcgccgccggt
tcgaccggcaccgtccccgccgccggcgacgtgctgaaggccgtggcgcgggcgccgctg
ggctgcgtcgtcctgcctggcctcgacctggatctggacgcgggcgtctggaaccagctg
gacgaacagcatccgcaaagtgcgatgaagcggctgctggaccgctgcgagatcgcgcgc
gagagcgtccgcccctggttccgtcccgccgttcctccggcccgcgaggcgcgcggactg
gcgcgccagcggctggtcaacgaggccctgcgtcccgccgaggcgaccgacgactggcgc
cgcgccatccgcgacatccgcttggcggccgttgcccgcaaggaggcgcgtgatccgatc
gccgagggcttgcagggcctttcccatctgtccgtccgcgccgaggaagaggccgccgcc
gccatcgccctgatgatgcgcgagacgctggagacacccggaaagacctgcgccctgatc
acgccggatcaggccctgggccgccgcgtcaccgcccggctggagcgttggggcgtcatc
cccgattcgtccgccggcgcccccctttcgcggctgcccgccggcgccctgatcgatctg
tgcgcccgctggatcgccgatccggtccagccccatctactgctcgccgtcgtcaaacat
ccgctggtccggttcgacctgggcgacacctttcaagcggcagccgtcgtcgcgctggag
gaacacgccctgcgcggcccccgcccacgcgacttcgccgccatccatcgccgcctgctg
gaggcggtacagcccgaccggcgcggcaaggcgccgcccgaatggaaacaggcccggctg
tcggccgcgacccgtctggtcgatcagcttcaggccgccatcgaggccgcgaccgccgtc
ttcgcgcccgatgcggatctagacgtcgccgcctcggccctgacccggctgatcgaaacc
ttagccggccagaacgcctgggccggccccgacggcgaggccgccgccgccctgttgtcc
ggcctgatcgagggcggggcctcgttgggccgtatccgccgcgcggaactggccgaactg
gtcacgtccctggtcaaggaaaacgtcgtgcgcaccggcggggccacccatccgtcgctg
cggattctgggggccatcgaggcgcgtctggtcagggcggaccgtatgatcctcgccggg
ctggaggaaggtgtgtggccccaggcggcgccgaccgaccccttcctgtcgcgcccgatg
cgaaaggcgctgggcctgcccccgcccgagcgccgcctgggccagacggcgcaggacttt
gtccaggccgcctgcgccgatgaagtcatcctgatccacagcgagcggcgcggcggccag
cccgccgtccgctcgcgctggctgtggcggctggagatgctgacgcgcggcgcgaacgct
gtcgaaacacccgtcgcaatcgcccgcccggcggccgtcatcgattgggcccgcgccttg
gacgcaccgccgcccggcccaccccagttcgccaaacggcccgagccgcgcccgcccgtg
catcgccgtccgcgcagcctgttcgtcacccgcatcgaacgctgggtgcgcgacccctac
gccatctacgccctgtgggtgctggggctggaggcgatggagcggcccggcgcgtctgcc
gaagcgctggctcggggcaacgccgtccacgccgccatcgaacggctgacgctggactgg
ccgaacgacctgcctgacgactgcgaggccatcctgcacgaccatctgctgcgcgaactg
ggcgcgcgcgggttcgaggatgcggccatggcccgcgaggcgccgctggcccgcaactgc
gcccgctggctgacagagttcgagcgccgacgccgcgcgcgcggcgtcgacatcatggtc
gaacagcaggggaccatgaccttcgacgcccccgccggccccttcaccgtcaaggctttc
gccgaccggatcgagctggcgtccgacggcgcggcggtcatggacttcaagaccggggcg
gcgccgtccgccaaacaggtcaagtccggcttcgcgccgcagctcaccctgaccgccgcc
atcctggccgacggcgggttcaaggacaccaacggcccggtcacgcccgacgaactgacc
tatgtccgcgtggtcgggcgaaagacggcgggcgaagtcgtcacccgcgcttcgggctct
gaggccgccgatttagcgcaggctgcgcttgacggcctgaagcgccgcgtcgcccggttc
gacaacgagaacacgccttacgtctcctgggccgcgcctcagtttatgggcaaccaaggc
ggcaactacgatcatctggcccgcgtctgggaatggtctgtgatcggcgatggggacgaa
gaatga
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