Brevundimonas sp. 'scallop': E4341_03950
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Entry
E4341_03950 CDS
T09204
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
bres
Brevundimonas sp. 'scallop'
Pathway
bres00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bres00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
E4341_03950
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bres01007
]
E4341_03950
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bres03016
]
E4341_03950
Enzymes [BR:
bres01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
E4341_03950
Amino acid related enzymes [BR:
bres01007
]
Aminoacyl-tRNA synthetase
Class II (U)
E4341_03950
Transfer RNA biogenesis [BR:
bres03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
E4341_03950
Prokaryotic type
E4341_03950
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
DUF7252
Motif
Other DBs
NCBI-ProteinID:
QIF80907
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All DBs
Position
807551..809974
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AA seq
807 aa
AA seq
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MKFTLSWLKDHLETEADVHQIADAMTMAGLEVEEVLDPAAKLAPFTVAKIVSAERHPNAD
RLQVCQVETVDGMKEIVCGAPNARAGLTTIYAPIGAYVPGLGVTLVEKPVRGVVSNGMLC
SASELELSDESDGIQELPPEIPVGTPVAGLFGAEPVIDFEVTPNRPDWLGVAGIARDLAA
ASVGKLKHFDIAVVRGAFPSPISVRLEAPEMCPVFAGRVIRGVKNGPSPVWLQKRLTAIG
LRSINRLVDVTNLIAYDRARPLHVYDVAKLSGTEIVVRAGQVSAATGDHEHLIALDGKTY
AASAADCVIADGGGERPIGLGGVMGGESTGCDETTTDVFLESAWFDPLVIAQTGRALGIH
SDAQYRFARGVDPVSVTPGLELATRLILDLCGGEPSEIVFVGEPPASPAPFAFDPAYVKR
LSGMDLADDRIGTILGQLGFLVQAAPAGQAEAWLVTPPSWRRDVEGPADLVEEVARIEGF
DSLPDTPLPEVARPAGGVLSPRQARVRTARRALAALGYAEAVTWSFTKQSTAALFGGGDD
RLVLENPIAADLDCMRPSALPNLVQAAARNAARGFADAALFEIGPIYLGDGPADQRTVIA
GLVAPHAARHWAGAGEDALFTLKGDLTTLLEEIGAPVASLQLVQGQNRDWWHPGRSARLQ
LGPKNVMVEFGELHPRVLKALDADGPMLAFEVVLDNVPEPRGKSGKARGSADLSALMPLT
RDFAFVVEGTKPVGDLVRAATGADKALIADVRVFDVYRGKGVDEGFKSVALEVVIQPREA
TLTEAEIEALTAKVVGAVEKQGGRLRA
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcaccctgtcctggctgaaggaccacctcgaaaccgaggcggatgttcatcag
atcgccgacgccatgaccatggccgggctggaggtcgaggaggtgctcgaccctgccgcc
aaactggcgcccttcaccgtggccaagatcgtttcggccgagcgtcatcccaacgccgac
cggttgcaggtctgccaggtcgagacggtcgatgggatgaaggagatcgtctgcggcgct
ccgaacgcgcgggcgggcctgaccaccatctacgcgcccatcggcgcctatgtgccgggc
ctgggcgtgaccctggtcgagaagccggtgcgcggcgtggtgtcgaacggcatgctgtgc
tcggcctcggagcttgagttgtcggacgagagcgacggcattcaggaactgccgccggag
atccccgtcggcacgccggtcgccggcctgttcggcgcagagccggtcattgatttcgaa
gttacgcctaaccggcccgactggctgggtgtcgccggcatcgcccgcgatctggccgcc
gccagtgtcggcaagctgaagcatttcgacatcgccgtggtgcgcggggccttcccgtcg
ccgatcagcgtgcggctggaggctcccgagatgtgcccggtcttcgccggtcgggtcatt
cgcggcgtcaaaaacggcccgtcgccggtctggctgcagaagcgtctgacggccatcggc
ctgcgctcgatcaaccgtctggtcgatgtaaccaatctgatcgcctatgaccgcgcccgg
ccgctgcacgtctatgacgtcgccaagctgtcggggaccgagatcgtggtgcgggcggga
caggtttcggccgcgaccggcgaccacgaacatctgatcgccctggacggcaagacctac
gccgcatccgcagccgactgcgtcatcgccgacggcgggggcgagcgccccatcggcctg
ggcggcgtcatgggcggggaatcgaccggctgcgatgagaccaccacggacgtcttcttg
gaaagcgcctggttcgacccgctggtcatcgcccagaccggccgtgcgctgggcatccat
tccgacgcccagtaccggttcgcgcgcggcgtcgatccggtctcggtcacgccaggtctg
gaactggccacgcgcctcatcctggacctgtgcggcggcgagccgtcggaaatcgtcttc
gtcggcgaaccgcccgccagccccgcgcccttcgccttcgaccccgcctatgtgaagcgt
ctcagcggcatggacctggccgacgaccggatcgggaccatcctgggccagctcggtttc
ctggttcaggctgcgcccgccggtcaggccgaggcctggctcgtcaccccgccgtcgtgg
cgtcgcgacgtcgaaggtccggccgatctggtggaagaggttgcgcgcatcgagggcttc
gacagcctgcccgatacgcctctgcccgaggtcgctcgccccgccggcggcgtgctgagc
ccgcgccaggcccgcgtccgcaccgcgcgccgggccctggcggccctcggttacgccgag
gccgtcacctggtccttcaccaagcaatcgacggcggccctgttcggcggcggcgacgac
cggctggtgctggagaatcccatcgcggccgatctggactgcatgcggccgtcggccctg
ccgaacctggtccaggcggcggcgcggaacgccgcgcgcggtttcgccgacgccgccctg
ttcgagatcggccctatctatctgggcgacggtccggcggatcagcgcacggtcatcgcc
ggtctggtcgccccgcacgccgcccgtcactgggcgggcgccggcgaagacgccctgttc
acgctcaagggcgacctgaccaccctgctggaggagatcggcgccccggtggcctcgctg
caactggtccagggccagaaccgcgactggtggcaccccggccgttcggcccggctgcaa
ctcggccccaagaatgtgatggtcgagttcggcgaactccacccgcgcgttctgaaggcg
ctggacgccgacggccccatgctggccttcgaggtcgtgctggacaatgtgcccgagccg
cgcggcaaaagcggcaaggcgcgcgggtcggcggacctgtcggccctcatgcccctgacg
cgcgacttcgccttcgtggtcgaaggcaccaagccggtgggcgatctggtccgggccgcg
acgggcgccgacaaggccctgatcgccgacgtgcgcgtcttcgacgtctatcgcggcaag
ggcgtggacgagggcttcaagtccgtggccctggaggtcgtgatccagccgcgcgaggcc
actctgaccgaagccgagatcgaggccttgaccgccaaggtcgtcggagcggtcgaaaag
cagggcggcaggctgcgggcttga
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