Brevundimonas sp. 'scallop': E4341_06155
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Entry
E4341_06155 CDS
T09204
Name
(GenBank) peptidoglycan-binding protein
KO
K21470
L,D-transpeptidase YcbB
Organism
bres
Brevundimonas sp. 'scallop'
Brite
KEGG Orthology (KO) [BR:
bres00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bres01002
]
E4341_06155
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bres01011
]
E4341_06155
Peptidases and inhibitors [BR:
bres01002
]
Cysteine peptidases
Family C82
E4341_06155
Peptidoglycan biosynthesis and degradation proteins [BR:
bres01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
E4341_06155
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QIF81314
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Position
complement(1253696..1255258)
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AA seq
520 aa
AA seq
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MNRRQLGLGVATAAMTLGSAARAQQVFVQRGPEATAFYNSFNDQISRLPETQQADVRAFY
EMNGWRPVWNADRVRALNTVAAGANRHGLAGSDYFDFVGLAADPASADLRTTAAALAYAR
VLAEGKVRPETVEDLWEMQKNRVDLPRGLSDALTRNVLGQWYDGLAPTDIGYQNLSAGYV
RYRRLAAQGGWPRFTQGATIEPGNSDRRIPALIDRLTAEGDLSAADGARLKSQGLVYNAE
LQRAVQSFQNRHGLGADGRIGAGTQRSLGASAEDRARQIALNLERRRWLKREVAPERIEV
NTAAAIMVYWKDGKPVHSNRVVVGSAENQTPSLEKPFASVVANPPWYVPAGIARREILPK
GPGYLAANDMYVKDGTVIQRAGPRSALGYVKFELRDSYAIFLHDTPSKAAFNLSTRQRSH
GCVRVQNAVEFARLLLSPDPTKLAQFDTAQDTRETTRVTTGREISVRLLYWTAFVDGQGR
VAFREDVYGRDDKLAQALGIGVNLPKPIDDGRADANDVGP
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgaatagacggcaactgggtctgggcgtcgcgacggcggccatgacccttggctcggcg
gcgcgcgcgcagcaggtcttcgtgcagcgcggaccggaggcgaccgccttctacaatagc
ttcaacgaccagatttcgcgtctgcccgagacgcagcaggcggatgtgcgcgccttttat
gaaatgaacggctggcggccggtgtggaacgccgaccgcgtgcgggccctgaacacggtc
gcggccggcgccaatcgccatggcctggcgggctccgactatttcgacttcgtgggacta
gcggccgatccggcgagcgcggacctgcggaccacggcggcggcgctggcctatgcccgc
gtcctggccgagggcaaggtgcggcccgagacggtcgaggatctgtgggaaatgcagaag
aaccgtgtggacctgccgcgcggcttgagcgacgccctgacccgcaatgtgctgggccaa
tggtacgacggcctggcgcccaccgacatcggctatcagaacctgtcggccggctatgtc
cgctatcgccgtctggcggcgcaaggcggctggccccgcttcacccaaggcgcgaccata
gagcccggcaacagcgatcgccgcatccccgccctgatcgaccgcctgacggccgagggc
gacctgtcggccgccgacggcgcgcggctgaagtcgcagggcctggtttacaacgccgaa
ctgcaacgtgcggtgcaaagcttccagaaccgccatggactgggcgccgacgggcggatc
ggcgcaggcacccagcgctcgctgggcgcctcggccgaggaccgtgcgcgtcagatcgcg
ctgaacctggagcgccgtcgctggctgaagcgcgaggtcgcgcccgagcggatcgaggtc
aacaccgccgccgccatcatggtctattggaaggacggcaagccggttcactccaaccgc
gtcgtggtcggctcggccgagaaccagacgcccagtctggagaagccgttcgcctcggtc
gtggccaatccgccctggtatgtgccggccggcatcgcgcgccgcgaaatcctgcctaag
gggccgggctatctggccgccaacgacatgtatgtgaaagacggcacggtcatccagcgc
gccggtccgcgctcagccttgggctatgtgaagttcgagctgcgcgacagctacgccatc
ttcctgcacgacacgccgtcgaaggccgccttcaacctgtccacgcgtcagcgcagccac
ggctgcgtgcgggtgcagaatgcggtggagttcgcgcgcctgctgctgtcgcccgatccg
accaagctggcccagttcgacacggcccaggacacgcgcgagacgacgcgcgtgaccacc
ggccgggaaatctcggtgcgtctgctgtactggaccgccttcgtggacggtcagggccgc
gtggcgttccgcgaggacgtctatggccgcgacgacaagctggcgcaggcgctgggcatc
ggcgtcaatctgcccaagcccatcgacgacggccgggcggacgccaacgacgtcgggccg
taa
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