Brevundimonas sp. 'scallop': E4341_07305
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Entry
E4341_07305 CDS
T09204
Name
(GenBank) oligogalacturonate lyase
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
bres
Brevundimonas sp. 'scallop'
Pathway
bres00040
Pentose and glucuronate interconversions
bres01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bres00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
E4341_07305
Enzymes [BR:
bres01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
E4341_07305
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase22
Motif
Other DBs
NCBI-ProteinID:
QIF83018
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Position
complement(1488548..1489705)
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AA seq
385 aa
AA seq
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MFLPKKVGAPNLMVISTPQGISTVDLATWAVKVLVADHDADLMFTGRKGRNVYYSVTAPG
EGQLMDRAKTLFVIDADTKQRREIGRIPNGQINSVNADESLLLGFVAYDSQPLQPTVPDP
RNRRFDQAEYEADGPDGKPLNFARAKGVRMLQRWAARYPMEIFVIDLTTGERRVIHKTNE
WIGHTQFSPTDPQQIIFCHEGPWHRVDRMWAIRADGTGLRKTHQRTMNFEIFGHEWFSPD
GKQVLYDLQTPRGQVFWVASVDLETGRRVYRRVEQNDWSVHYNVSPDGSLFAGDGGDGDM
VAHAPDGKWLVLLRPEPIVDEDPSSDKDNQIFVEYLRSERLVDLSNHDYRLEPNLTFTPD
AKWIVFVSNMHGANHVYAVEVDRSA
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgttcttgcccaagaaggtcggggcgcccaacctgatggtcatctcgacacctcagggc
atctcaacggtcgatctggcgacctgggccgtcaaagtcttggttgccgaccatgacgcg
gacctgatgttcacgggccgcaaggggcgcaacgtctattattcggtgaccgcgcctggc
gaaggccaattgatggaccgcgccaagaccctgttcgtcatcgacgccgacaccaagcag
cgtcgcgagatcggccggataccgaacggtcagatcaattcggtcaatgccgatgagagc
ctgctcctgggcttcgtggcttatgacagccaaccgctacagccgaccgtgcccgacccg
cgcaaccgccgcttcgatcaggccgaatatgaagctgatgggccggacggaaagccgctg
aacttcgcccgcgccaagggggtgcggatgcttcaacgctgggccgcgcgctatccgatg
gaaatcttcgtcatcgacctgaccacgggcgagcgacgcgtgatccacaagaccaacgaa
tggatcggccacacacagttctcccccaccgacccccagcagatcatcttttgccatgaa
ggaccttggcaccgcgtggatcgaatgtgggctatccgcgcagatggcacgggcctgaga
aagacccatcagcggacgatgaacttcgagatcttcggccacgaatggttcagcccggac
ggcaaacaggtgctctatgacctgcaaaccccgcgcggccaggtcttctgggttgcctcg
gtcgatctggagacgggccgccgggtctatcgtcgggtcgagcagaatgactggtcggtt
cattacaacgtctcgccggacggcagtctattcgctggcgacggcggcgacggcgacatg
gtcgctcatgcgcccgacggtaaatggctggtcctactgcgccccgaaccgatcgttgat
gaagatccgtctagcgacaaggacaaccagatcttcgtcgaatacctgcgatccgagcgg
ctcgtggatctgtcaaaccacgactaccggcttgagccgaatctgactttcacgccggac
gcaaaatggatcgtcttcgtatcgaacatgcacggcgccaaccacgtctatgctgtcgaa
gttgatcgcagcgcttag
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