Brevundimonas sp. 'scallop': E4341_09595
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Entry
E4341_09595 CDS
T09204
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bres
Brevundimonas sp. 'scallop'
Pathway
bres03420
Nucleotide excision repair
bres03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bres00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
E4341_09595
03430 Mismatch repair
E4341_09595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bres03400
]
E4341_09595
Enzymes [BR:
bres01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E4341_09595
DNA repair and recombination proteins [BR:
bres03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E4341_09595
MMR (mismatch excision repair)
Other MMR factors
E4341_09595
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
AAA_11
DUF3553
PcrA_UvrD_tudor
Metallophos_C
Agd3_CE
Motif
Other DBs
NCBI-ProteinID:
QIF81930
LinkDB
All DBs
Position
1924632..1927007
Genome browser
AA seq
791 aa
AA seq
DB search
MTDIFAPVTDLPAPRISDLARARAPEGEAPRDYLKGLNPEQREAVETTEGPVLVLAGAGT
GKTRVLTTRLAHILATGRAKPWELLAVTFTNKAAREMRERITHLIGPSAEGLRWLGTFHS
IAAQILRRHAELVGLKSSFTILDTDDQERVLKQLLEAANIDTKRWTPKSLSGLIDHWKNR
GWTPDKLPPGEDFANGKGQGLYAAYQARLRSLNACDFGDLLLHNITILSQHADLAEEYRR
RFRYILVDEYQDTNVAQYLWLRLLTASTGNVCCVGDDDQSIYGWRGAEVDNILRFERDFP
GAKIVKLERNYRSTSHILGAASGLIAANRDRLGKTLWTEDDSGDKVRVRGVWDGEAEARL
IADEIETARRPHAGEPGLKYKDMAILVRASFQMRAFEERLVMLAIPYTVIGGPRFFERAE
IRDAHAYLRLILSEDDDLAFERIVNVPKRGIGDTSVQKILQLARQHDLSALTAVRGLINT
DELQARTRTALSNFVRDIDRWRQLSETTPHWQVMETVLEESGYTDMQKADRTSGQTRLEN
LKELTQSMQQFETLQAYLEHVSLVMDLERATSDDPNGDGAVQIMTLHGAKGLEFPLVFLP
GWEEGVFPSQRSIDEKGEKGLEEERRLAYVGVTRAKQDARISFAANRLVYGRWTSQLPSR
FVDELPIAHVDPQSDTGYYGASTGMKEAKSRWDDAPSFGSGYSSPGWKRAQSFTAAQTPA
KIPARKAVIEGDGRLIATADPKSSSGWKKGERVFHQKFGYGNVRVIEGNKLLVEFEKAGE
KRVIDSFVEKA
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
ctgacggatatttttgcgcctgtgactgatcttcccgccccccgtatttccgacctcgcg
cgcgctcgtgcgcccgagggcgaggcgccgcgcgattatctgaaggggctgaatccggag
cagcgcgaggcggtcgagacgaccgaggggccggtgctggtgcttgccggcgccggcacg
ggcaagacgcgcgtgctgacgacacggctggcgcacattctggcgacaggccgggcaaag
ccgtgggagctgctggccgtcaccttcaccaacaaggccgcgcgcgaaatgcgcgagcgc
atcacgcatctgatcggcccctccgccgaaggtttgcgctggctgggcaccttccactcc
atcgccgcccagatcctgcgtcgccacgccgaactggtcggtctgaaatccagcttcacc
atcctggacaccgacgaccaggaacgagtgctgaaacagctgctggaagcggccaacatc
gacaccaaacgctggacgcccaagtcgctgtccggcctgatcgatcactggaagaaccgc
ggttggacgccggacaagctgccaccgggcgaggacttcgccaacggcaagggtcagggt
ctgtacgccgcctatcaggcgcgcttgcgcagcctgaacgcctgcgacttcggcgatctg
ctgctgcacaacatcactatcctgtcgcagcatgcggacctggctgaggaatatcgccgt
cggttccgctacatcctggtggacgaataccaggacaccaacgtcgcccagtatctgtgg
ctgcggctgctgacggcctcgacaggcaacgtctgctgcgtcggcgacgatgatcagtcg
atctatggctggcgcggggccgaggtagacaacatcctgcgcttcgagcgcgacttcccc
ggcgccaagatcgtcaagctggagcgtaactatcgctcgaccagtcatatcctgggggcg
gcgtccggcctgatcgctgccaaccgcgaccggcttggcaagaccctgtggaccgaggac
gacagcggcgacaaggtgcgggtgcgcggcgtgtgggacggcgaggccgaggcccggctg
atcgccgacgagatcgagaccgcgcggcgtccccacgctggcgaaccgggcctgaaatac
aaggacatggccattctggtccgcgcttcgtttcagatgcgcgcctttgaagaacgcctg
gtcatgctggccatcccatacaccgtcatcggcgggccgcgcttcttcgagcgcgccgag
atccgcgacgcccacgcctatctgcgcctgatcctgtcggaagacgacgacctcgccttc
gaaaggatcgtcaatgtgcccaaacgcggcatcggcgacaccagcgtgcagaaaatcctg
caactggcccgccaacacgacctgtcggccctgaccgccgtgcggggcctgatcaatacc
gacgagcttcaggcccgcacccgcaccgccctgtccaacttcgtgcgcgacatcgaccgc
tggcgccaactgtccgagaccacgccccactggcaggtcatggagacggtgctggaggag
agcggctataccgacatgcagaaggccgaccgcaccagcggccagacccgcctggagaac
ctgaaggaactgacccagtcgatgcagcagttcgagacgctgcaagcctatcttgagcac
gtctctctggtcatggatctggagcgcgcgaccagcgacgatcccaacggcgacggggcg
gtccagatcatgaccctgcacggcgccaagggactggagtttccgctggtcttcctgccg
ggctgggaagaaggcgtcttccccagccagcgcagcatcgatgagaagggcgagaagggt
ctcgaggaggaacgccgtctggcctacgtcggcgtcacacgcgccaagcaggacgcccgc
atctccttcgccgccaaccggctggtctatggacgctggacctcccaactgcccagccgc
ttcgtcgacgaactgcctatcgcccacgtcgatccccaatccgacaccggctattacggc
gcttcgaccggcatgaaggaggcaaaaagccgctgggacgacgcgccatctttcggcagc
ggttattcctcccccggctggaaacgcgcccaatccttcaccgccgcccagaccccggcc
aagataccggcgcgcaaggccgtcatcgaaggcgacggccgactgatcgccaccgccgac
cccaaatccagctcaggctggaaaaagggcgaacgcgtctttcaccagaagttcgggtac
ggaaacgtgcgcgtcatcgaaggcaacaaactgctggtcgagttcgaaaaggccggggag
aagcgcgtgatcgacagctttgtcgagaaggcctaa
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