KEGG   Brevundimonas sp. 'scallop': E4341_11235
Entry
E4341_11235       CDS       T09204                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
bres  Brevundimonas sp. 'scallop'
Pathway
bres00010  Glycolysis / Gluconeogenesis
bres00020  Citrate cycle (TCA cycle)
bres00260  Glycine, serine and threonine metabolism
bres00280  Valine, leucine and isoleucine degradation
bres00310  Lysine degradation
bres00380  Tryptophan metabolism
bres00620  Pyruvate metabolism
bres00630  Glyoxylate and dicarboxylate metabolism
bres00640  Propanoate metabolism
bres00670  One carbon pool by folate
bres00785  Lipoic acid metabolism
bres01100  Metabolic pathways
bres01110  Biosynthesis of secondary metabolites
bres01120  Microbial metabolism in diverse environments
bres01200  Carbon metabolism
bres01210  2-Oxocarboxylic acid metabolism
bres01240  Biosynthesis of cofactors
Module
bres_M00009  Citrate cycle (TCA cycle, Krebs cycle)
bres_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
bres_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
bres_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
bres_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:bres00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    E4341_11235 (lpdA)
   00020 Citrate cycle (TCA cycle)
    E4341_11235 (lpdA)
   00620 Pyruvate metabolism
    E4341_11235 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    E4341_11235 (lpdA)
   00640 Propanoate metabolism
    E4341_11235 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    E4341_11235 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    E4341_11235 (lpdA)
   00310 Lysine degradation
    E4341_11235 (lpdA)
   00380 Tryptophan metabolism
    E4341_11235 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    E4341_11235 (lpdA)
   00670 One carbon pool by folate
    E4341_11235 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bres04147]
    E4341_11235 (lpdA)
Enzymes [BR:bres01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     E4341_11235 (lpdA)
Exosome [BR:bres04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   E4341_11235 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_oxidored NAD_binding_8 AlaDh_PNT_C Pyr_redox_3 GIDA HI0933_like FAD_binding_2 XdhC_C UDPG_MGDP_dh_N DAO Thi4 Lycopene_cycl 3HCDH_N
Other DBs
NCBI-ProteinID: QIF82226
LinkDB
Position
2253751..2255163
AA seq 470 aa
MSRSTTSYDLVIIGGGPGGYPCAIRASQLGLSVAVIDDRELLGGTCLNIGCIPSKALLQA
TERLEMARNLEAFGVMVDNVRADLDGVMRHKGKVVTELGEGVAYLLRKHKVARFQGRGRL
LARDRVEVRAADGAFEVQARKAVVIASGSEAATLPDLPIDERRIVTSAGALSLTAAPRHL
AVIGGGYVGLELGSVWRRLGSEVTVIEVLDRIASGVDSEMSATLHKVLEAQGFQFCLGHK
VVGSRMEGDDVVLDVEPMGDGARGTIKADVVLVSIGRRPATAGLDLETVGIAPDRRGFIP
VDEGFRTSADGVYAIGDVIGGAMLAHKAEEEGIALAERLAGGAGHVDYGTIPAVVYTWPE
LASVGRTEDDLKAAGVAYRVGRFPFSANAMAKARLEKNGLVKVLADAATDKILGVHILGP
EAGGLIHEAVAAMQFGAAAEDLARTSHAHPTLPEALREACLAVAERTIHL
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgagccgttcgacgacctcctacgacctggtgatcatcggcggcgggccgggcggatac
ccgtgtgctatccgggcgagccaactcggcctgtcggtggcggtcatcgacgaccgcgaa
ctgctcggggggacctgcctgaacatcggctgcattccgtccaaggcgctgctccaggcc
accgagcggctggagatggcgcgcaatctcgaagcgttcggcgtcatggtcgacaatgtg
cgggccgatcttgacggtgtcatgcggcacaagggcaaggtggtgaccgagcttggcgaa
ggggtcgcctacctcctgcgcaagcacaaggtcgcccgcttccagggccgcggccggctg
ctggcgcgcgaccgggtggaggtgcgcgccgcggacggcgctttcgaggtgcaggcccgc
aaggcggtggtcatcgccagcggatcggaagcggcgaccttgcccgacctgcccatcgac
gagcggcggatcgtcacctccgccggcgccctgagcctgacggcggcgccgcgccatcta
gcggtgatcggcggcggctacgtcggactggagctggggtcggtctggcgtcggctcggc
agcgaggtcacggtcatcgaagtgctcgaccggatcgcctccggcgtcgactcggagatg
tcggcgacgctgcacaaggtgctcgaggcccagggcttccagttctgccttgggcacaag
gtggtcggatcgcggatggagggcgacgacgtcgtcctcgacgtcgagcccatgggcgat
ggcgcgcgaggaaccatcaaggccgatgtcgtgctggtctccatcggccgacggcccgcc
accgccgggctcgatctggaaacggtcggcattgcgcccgaccgcaggggctttattccg
gtggacgaagggttccggaccagcgccgacggggtttacgccatcggcgacgtcatcggc
ggcgccatgctggcccacaaggcggaggaggaagggatcgccctggccgaacgcctggcg
gggggcgcgggccatgtggactacggaacgattccggcggtcgtctatacctggccggaa
ctggcttcggtcggccgcacggaggacgacctcaaggcggccggcgtggcctaccgtgtg
gggcgcttccccttctccgccaacgccatggccaaggcgcgtctggagaagaacggtctg
gtcaaggttctggccgacgccgcgacggacaagatcctcggcgtgcacatcctgggcccc
gaagccggcgggttgatccatgaagcggtcgccgccatgcagttcggcgcggcagccgag
gatctggcgcggacaagccacgcccatccgaccctgccggaagccctgcgcgaagcctgc
ctggcggtagccgagcgcacgatccacctctga

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