Brevundimonas sp. 'scallop': E4341_14565
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Entry
E4341_14565 CDS
T09204
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
bres
Brevundimonas sp. 'scallop'
Brite
KEGG Orthology (KO) [BR:
bres00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bres03016
]
E4341_14565
Enzymes [BR:
bres01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
E4341_14565
Transfer RNA biogenesis [BR:
bres03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
E4341_14565
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QIF82809
LinkDB
All DBs
Position
complement(2932468..2933082)
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AA seq
204 aa
AA seq
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MTVYLHEGDLPDDLDLGSEVAIDSETMGLRFRRDPLCVVQLSSGDGNAHVVRLNRPAYDC
PNLKRVLTDPAVTKIFHFGRFDIGMFLLHLGVETRPVYCTKIASKLARTYTDRHGLKDVV
RETVGVDLSKAQQSSDWGAETLSPAQLDYAASDVLYLHAAKAKLDMMLAREGRTELAAKC
FDFLPTRSALDLAGWDETDIFAHS
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtttacctgcatgagggcgacctgcccgacgatctggacctggggtccgaggtc
gccatcgattccgagacgatgggcctgcgttttcgccgcgatcctctgtgcgtggtgcag
ctgtcgtcgggcgacggaaacgcccatgtcgtgcggctgaaccggccggcctatgactgt
ccgaacctgaagcgggtgctgaccgatccggcggtgaccaagatcttccacttcggccgg
ttcgacatcggcatgttcctgctgcacctcggcgtcgagacgcgaccggtctactgcacc
aagatcgcctccaagctggcgcgcacctatactgaccggcacgggctgaaggacgtggtg
cgcgagacggtgggcgtggacctgtccaaggcgcagcagtcctcggactggggcgccgag
acgctgagcccggcgcagctggactatgcggcgtcggacgtcctgtatctgcacgcggcc
aaggccaagctggacatgatgctggcgcgcgaagggcgaaccgaactggccgccaaatgt
ttcgacttcctgccgacacggtcggcgctcgacctggcaggctgggacgagaccgacatc
ttcgcccacagctga
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