Brevundimonas sp. M20: FKQ52_00220
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Entry
FKQ52_00220 CDS
T10469
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
breu Brevundimonas sp. M20
Pathway
breu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
breu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FKQ52_00220 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
breu03021
]
FKQ52_00220 (rho)
03019 Messenger RNA biogenesis [BR:
breu03019
]
FKQ52_00220 (rho)
Transcription machinery [BR:
breu03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
FKQ52_00220 (rho)
Messenger RNA biogenesis [BR:
breu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FKQ52_00220 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_22
ATPase_2
OB_RNB
NACHT
AAA_14
AAA
AAA_25
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
QDH71977
LinkDB
All DBs
Position
complement(44102..45508)
Genome browser
AA seq
468 aa
AA seq
DB search
MTDVRDTDPTAPATETLDEVSNEVSAADLPMVDQEADEDEDGEPIVPNGRITLAELNAKT
PEDLVAFAEGLEVENASNLRKQDLLFAILKALAEEEVEIIADGVLEILPDGFGFLRSPDA
NYLPGPDDIYVSPSQIRRFGLRSGDTIHGAVRGPREGERYFALLKVDTINLEDPELVKTK
VLFDNLTPLYPEERIHMEIQDPTLKDRSGRVIDIVAPLGKGQRCLIVAPPRVGKTVMLQN
IAKSIERNHPEVFLIVLLIDERPEEVTDMQRTVKGEVIASTFDEPATRHVAVAEMVIEKA
KRLVEHKKDVVILLDSITRLGRAYNATVPSSGKVLTGGVDANALQRPKRFFGAARNVEQG
GSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPAIDVLKSGTRKEDL
ITPKDQLAKTYVLRRILNPMGPQDAIEFLLDKLRQSKNNSDFFQSMNT
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgtccgcgacaccgatccgaccgcgcccgcgaccgaaaccctggatgaggtt
tccaacgaagtctccgccgccgacctgccgatggtcgatcaggaggccgatgaggatgag
gacggcgagccgatcgtcccgaacggccgcatcaccctggccgagctgaacgccaagacc
ccggaagatctggtcgccttcgccgaggggcttgaggtcgagaacgcctcgaacctgcgc
aagcaggacctgctgttcgccatcctcaaggccctggccgaggaagaggtcgagatcatc
gccgacggcgttctggaaatcctgccggacggcttcggcttcctgcgcagcccggacgcc
aactaccttccgggtccggacgatatctatgtctcgccgtcgcagatccgccgcttcggc
ctgcgctcgggcgacacgatccatggcgccgtccgcggtccgcgcgagggtgagcgttat
ttcgccctgctgaaggtcgacacgatcaatctggaagacccggaactggtcaagaccaag
gtcctgttcgacaacctgaccccgctctatcccgaagagcggattcacatggagatccag
gacccgaccctgaaggatcgttcgggccgggtgatcgacatcgtcgccccactcggcaag
ggccagcgctgcctgatcgtcgccccgccgcgcgtcggcaagacggtcatgctgcagaac
atcgccaagtcgatcgagcgcaaccacccggaagtcttcctgatcgtcctgctgatcgac
gaacgcccggaagaagtgacggacatgcagcgcacggtgaagggcgaggtcatcgcctcg
accttcgacgagccggccacccgccacgtcgccgtcgccgaaatggtgatcgaaaaggcc
aagcgtctggtcgagcacaagaaggacgtcgtgatcctgctggactcgatcacccgtctg
ggccgcgcctacaacgccaccgtcccgtcgtcgggcaaggtgctgaccggcggtgtcgac
gccaacgccctgcagcggcccaagcgcttcttcggcgccgcgcggaacgtggagcagggg
ggctcgctgaccatcatcgccaccgccctgatcgacaccggctcgcgcatggacgaggtg
atcttcgaagagttcaagggcaccggtaactcggaaatcgtcctggaccgcaaggtcgcc
gacaagcgtatcttcccggccatcgacgtgctcaagtcgggcacccgcaaggaagacctc
atcacgccgaaggaccagctggccaagacctacgttctgcgccgcatcctcaacccgatg
gggccgcaggacgcgatcgagttcctgctcgacaagctgcgccagtccaagaacaacagc
gacttcttccagtcgatgaatacctga
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