Brevundimonas sp. M20: FKQ52_03420
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Entry
FKQ52_03420 CDS
T10469
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
breu Brevundimonas sp. M20
Pathway
breu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
breu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FKQ52_03420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
breu03019
]
FKQ52_03420
Enzymes [BR:
breu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FKQ52_03420
Messenger RNA biogenesis [BR:
breu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FKQ52_03420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
QDH74895
UniProt:
A0A514C5I0
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All DBs
Position
complement(721122..722609)
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AA seq
495 aa
AA seq
DB search
MGLNPALLTALKAEGYETPTPIQQKSIPDVMLGKDLLGIAQTGTGKTAAFALPILHRLAA
NRVAPVPRTTRCLVLSPTRELATQIAESFKAYGKHLGFRVAVIFGGVKYGGQERSLNQGL
DILVAAPGRLLDHIQQKNLDLSATEIFVLDEADQMLDLGFIKPIRQIVSRMPAKRQNLFF
SATMPTEIGKLAGELLKEPVKVQVTPQSTTVERINQSVIHIEQGRKRALLTEMFADPEYT
RCLVFTKTKHGADKVAAYLEAGGVEAGAIHGNKSQPQRERTLAAFKAGKLRVLVATDIAA
RGIDVDGVSHVVNFELPYVPEAYVHRIGRTARAGKDGSAVSFVAGDEMKLLKDIEKVTRQ
KIPSSDRRNDKSLALLDQSIMASGVKNKASMPDDGRGDRQQQQRGPRNPRRDGIKLEGGG
QPHRVRKAGARDAAARPTPERAFDPMARDRPRNTNNDPRHTSAPPAREPKPVGEMKRRPR
RRKPSNGGKGYAAKG
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgaacccggccctgctgaccgccctgaaggcggaaggctatgagaccccgacc
ccgatccagcagaaatccatcccggacgtgatgctgggcaaggacctgctgggcatcgcc
cagacgggcaccggcaagaccgccgccttcgccctgccgatcctgcaccgtctggccgcc
aaccgcgtcgcgcctgtgccgcgcaccacccgctgcctggtcctgtcgcccacgcgcgaa
ctggccacccagatcgctgaaagcttcaaggcctacggcaagcatctgggcttccgcgtc
gccgtcatcttcggcggcgtgaagtacggcgggcaggaacgttcgctgaaccagggcctc
gacatcctggtcgccgcgccgggccgtctgctggaccacatccagcagaagaacctggac
ctgtcggccaccgaaatcttcgtgctggacgaggccgaccagatgctggacctcggcttc
atcaagccgatccgccagatcgtcagccgtatgccggccaagcgtcagaacctgttcttc
tcggccaccatgccgacggagatcggcaagctggcgggtgaactgctgaaagagccggtc
aaggttcaggtgacgccgcagtcgaccacggtcgagcgcatcaaccagtcggtcatccac
atcgagcaaggccgcaagcgcgccctgctgaccgagatgttcgccgatcccgagtacacg
cgctgcctggtcttcaccaagaccaagcacggcgccgacaaggtcgctgcctatctggaa
gccggcggcgtcgaggccggcgccatccacggcaacaagtcccagccgcagcgtgaacgc
acgctggccgccttcaaggccggcaagctgcgcgtgctggtcgccaccgacatcgccgcg
cgcggcatcgacgtggacggcgtgtcgcacgtcgtgaacttcgagctgccctatgtgccg
gaagcctatgtccaccgcatcggccggacggcccgcgcgggcaaggacggttcggccgtc
agcttcgtcgccggcgacgagatgaagctgctgaaggacatcgagaaggtcacgcgtcag
aagattccgtcgagcgaccgccgcaacgacaagtcgctggccctgctggaccagtcgatc
atggcgtcgggcgtgaagaacaaggcctcgatgccggatgacggtcgtggggatcgccag
cagcagcaacgtggcccgcgcaacccgcgtcgcgacggcatcaagctggaaggcggcggc
cagccgcaccgcgtccgcaaggccggcgcccgcgacgccgccgctcgcccgaccccggaa
cgcgccttcgatccgatggcccgcgaccggccgcgcaacaccaacaacgacccgcgccac
acctcggccccgccggcccgggagccgaagccggtcggtgagatgaagcgtcgcccgcgt
cgccgcaagccgtcgaacggcggcaagggctacgccgccaagggctga
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