KEGG   Brevundimonas sp. M20: FKQ52_05465
Entry
FKQ52_05465       CDS       T10469                                 
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
breu  Brevundimonas sp. M20
Pathway
breu03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:breu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    FKQ52_05465 (rpoC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:breu03021]
    FKQ52_05465 (rpoC)
   03400 DNA repair and recombination proteins [BR:breu03400]
    FKQ52_05465 (rpoC)
Enzymes [BR:breu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     FKQ52_05465 (rpoC)
Transcription machinery [BR:breu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     FKQ52_05465 (rpoC)
DNA repair and recombination proteins [BR:breu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      FKQ52_05465 (rpoC)
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 RPOC_hybrid
Other DBs
NCBI-ProteinID: QDH72913
UniProt: A0A514BZS7
LinkDB
Position
1169680..1173876
AA seq 1398 aa
MNQEVLNIFNPVPVTPTFDQIRIALASPEKIRSWSFGEIKKPETINYRTFKPERDGLFCA
RIFGPTKDYECLCGKYKRMKYKGIICEKCGVEVTLARVRRERMGHIELASPVAHIWFLKS
LPSRISLMLDMALKDVERVLYFENYIVTEPGLTPLKQNQLLTEDEFYRYQDEFGDDGFTA
EIGAEAVRNLLMGIDLNAEAEKHRGELADNPSEMKAKKASKRLKLIEAFLESGNKPEWMI
LNVVPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIIRNEKRM
LQESVDALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVITVG
PELKLHECGLPKKMALELFKPFIYARLDAKGLSGTVKQSKRMVEREQPQVWDILDEVIRE
HPVLLNRAPTLHRLGIQAFEPKLIEGKAIRLHPLVCTAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILSPANGKPIIVPSQDIVLGLYYLSLVKDGETGEGKLFANMGEIDAALD
AKAVTLHTKIKARWTEMNAAGEVVTKVIDTTPGRMKLGALLPHNPNIGYRLLEKNLTKKE
IGNLIDQVYRHCGQKATVIFADQMMQLGFREAAKAGISFGKDDIVIPEAKAGLVAETRTQ
VEEYEQQYADGLITKGEKYNKVVDAWAKVTDKIADAMMGEIAQPRVLAPGQKPDINSVFM
MANSGARGSQAQMKQLGGMRGLMAKPSGEIIETPIISNFKEGLTVLEYFNSTHGARKGLA
DTALKTANSGYLTRRLVDVAQDSIVTEDDCGSTRGITLRAVVEGGDVLVSLGQRVLGRYA
AEDIKEPGGDTVLFPADTYLQEEEIEVIDKAGVQSIKVRSALTCEAEAGICAYCYGRDLA
RGTNVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGTAQVAETSFYEATNAGVAKINGPTV
KAAHGDLVAMSRNVTVVVTVDGKDRETHKVPYGARIRVKEGGDIAKGQRLAEWDPYTTPI
LTEVAGTVRFEDLVEGLSVKEETDEATGIAQRVVSDWRASPRGSDLRPAMGVTNGDAYAK
LASGSDARYLLPVGAVLSVNNGDEVKPGEIIARVPTEGAKTRDITGGLPRVAELFEARRP
KDCAVIAEMDGRVEFGRDYKNKRRIKITPEPDADGNQGEAVEFLIPKGKHISVHDGDLIQ
KGDYIIDGNPDPHDLLRIQGVEALAEYLVNEVQEVYRLQGVPINDKHIEVIVRQMLQKVE
VLDSGETTLIRGDTVEVAEAVLENAKVEKRGGRLATTQPVLLGITKASLQTRSFISAASF
QETTRVLTDASVNGKRDTLEGLKENVIVGRLIPAGTGAYLRSLQKIANERDAELTQARED
AVEPLPADLALELEKSEG
NT seq 4197 nt   +upstreamnt  +downstreamnt
atgaaccaggaagtcctgaacatcttcaacccggtcccggtcaccccgaccttcgaccag
atccggatcgcactggcctcgccggagaagatccgctcgtggtcgttcggcgagatcaag
aagccggaaaccatcaactaccgcacgttcaagcccgagcgtgacggcctgttctgcgcc
cgtatctttggcccgaccaaggactacgaatgcctgtgcggcaagtacaagcgcatgaag
tacaagggcatcatctgcgagaagtgcggcgtcgaagtcaccctggcccgcgttcgtcgc
gagcgcatgggccacatcgagctggcctcgccggtcgcccacatctggttcctgaagtcg
ctgccgtcgcgcatctcgctgatgctcgatatggcgctgaaggacgtcgagcgcgtcctg
tatttcgagaactacatcgtcaccgagccgggcctgaccccgctgaagcagaaccagctg
ctgacggaagacgagttctaccgttaccaggacgagttcggcgatgacggcttcaccgcc
gagatcggcgccgaggccgttcgcaatctgctgatgggcatcgacctgaacgccgaggct
gaaaagcaccgcggcgagctggccgacaacccgtcggaaatgaaggcgaagaaggcctcc
aagcgtctgaagctgatcgaggccttcctcgaaagcggcaacaagcccgagtggatgatc
ctgaacgtcgttccggtcatcccgccggaactgcgtccgctggtgccgctggacggcggc
cgcttcgcgacctcggacctgaacgacctgtatcgccgggtcatcaaccggaacaaccgc
ctgaagcgcctgatcgagctgcgcgcgccggacatcatcatccgcaacgaaaagcggatg
ctgcaggaatcggtcgacgccctgttcgacaacggccgtcgcggtcgcgtcatcaccggc
gccaacaagcgtccgctgaagtcgctcgccgacatgctgaagggcaagcagggtcgcttc
cgtcagaacctgctcggcaagcgcgtcgactactcgggtcgttcggtcatcaccgtgggt
ccggaactgaagctgcacgagtgcggcctgccgaaaaagatggcgctggagctgttcaag
ccgttcatctacgcgcgtctggacgccaagggcctgtcgggcaccgtcaagcagtccaag
cgcatggtggagcgcgagcagccgcaggtgtgggatatcctcgatgaggtcatccgcgaa
cacccggtcctgctgaaccgcgccccgaccctgcaccgtctgggcatccaggcgttcgag
ccgaagctgatcgagggcaaggccatccgcctgcacccgctggtctgtaccgcgttcaac
gccgacttcgacggcgaccagatggccgtgcacgtcccgctgagcctcgaggctcagctg
gaagcgcgcgtcctgatgatgtcgacgaacaacatcctgtcgcccgccaacggcaagccg
atcatcgtgccgtcgcaggacatcgtcctgggtctgtactacctgtcgctggtcaaggac
ggcgaaaccggcgaaggcaagctgttcgccaacatgggtgaaatcgacgccgcgctcgac
gccaaggccgtgacccttcacacgaagatcaaggcccgctggaccgagatgaacgccgcc
ggcgaagtggtgaccaaggtcatcgacacgacgccgggccgcatgaagctcggcgcgctg
ctgccgcacaacccgaacatcggctaccgcctgctcgagaagaacctgaccaagaaggag
atcggtaacctgatcgatcaggtctatcgtcactgcggtcagaaggcgacggtcatcttc
gccgaccagatgatgcaactgggcttccgtgaagccgccaaggccggcatctcgttcggc
aaggacgacatcgtcattccggaagccaaggccggtctggtcgcggaaacccgcacccag
gtggaagagtacgagcagcaatacgctgacggcctcatcaccaagggcgagaagtacaac
aaggtcgtcgacgcctgggccaaggtcacggacaagatcgctgacgcgatgatgggcgag
atcgcgcagccgcgcgttctggctcccggccagaagccggacatcaactcggtgttcatg
atggccaactcgggcgcccgtggttcgcaggcgcagatgaagcagctgggcggcatgcgg
ggcctgatggccaagccgtcgggcgagatcatcgagaccccgattatctcgaacttcaag
gaaggcctgaccgtgctggagtacttcaactccacccacggcgcccgtaagggtctggcc
gacaccgcgctgaagaccgccaactcgggctacctgacccgtcgtctggtggacgtggcg
caggactcgatcgtcaccgaggacgattgcggctcgacgcggggcatcaccctgcgcgcc
gtggtcgaaggcggcgacgtgctggtttcgctgggccaacgtgttctgggtcgctacgcg
gccgaggacatcaaggagccgggcggcgacaccgtcctgttcccggcggacacctatctc
caggaagaggagatcgaggtcatcgacaaggccggcgtccagtcgatcaaggtccgttcg
gccctgacctgtgaagccgaagccggtatctgcgcctactgctacgggcgtgacctggcg
cgcggcaccaacgtcaacatcggtgaagccgtgggcgtcatcgccgcccagtcgatcggt
gagccgggcacccagctgaccatgcggaccttccacatcggcggcaccgcgcaggtggcg
gaaacctcgttctacgaggcgaccaacgccggtgtggccaagatcaacggcccgaccgtc
aaggcggcgcacggcgatctggtggccatgagccgcaacgtcaccgtcgtcgtcaccgtg
gacggcaaggaccgcgagacccacaaggtcccctacggcgcccgcatccgcgtcaaggaa
ggcggcgacatcgccaagggccagcgtctggcggagtgggacccctacaccaccccgatc
ctgacggaagtcgccggtacggtgcgcttcgaggacctggtcgaaggcctgtcggtcaag
gaagaaaccgacgaagcgacgggtatcgcccaacgcgtcgtcagtgactggcgcgcgtcg
ccccgcggttcggacctgcgtccggccatgggcgtgaccaacggcgacgcctacgccaag
ctggcttcgggctccgatgcccgttacctgctgcccgtgggcgcggttctgtccgtgaac
aacggcgatgaggtcaagccgggcgagatcatcgcccgcgttccgaccgaaggcgccaag
acccgcgacatcaccggcggtctgccgcgcgtcgccgaactgttcgaagcccgtcgtccg
aaggactgcgccgtcatcgccgaaatggatggccgcgttgagttcggtcgcgactacaag
aacaagcgccgcatcaagatcaccccggagccggatgccgacggcaaccagggcgaagcg
gtcgaattcctgatcccgaagggcaagcatatctccgtccacgacggcgatctgatccag
aagggcgactacatcatcgacggcaacccggatccgcacgatctgctgcgcatccagggc
gtcgaagcgctggccgaatacctcgtgaacgaagtgcaggaagtctatcgcctgcaaggc
gtgccgattaacgacaagcacatcgaggtcatcgtccgtcagatgctgcagaaggtcgag
gtcctggattcgggtgaaaccaccctgatccgcggcgacaccgtcgaagtggctgaagcc
gtgctggaaaacgccaaggtcgagaagcgtggcggccgtctggccaccacccagccggtc
ctgctgggcatcaccaaggcgtcgctgcagacccgcagcttcatctcggcggcgtcgttc
caggagaccacccgcgtcctcaccgacgcctcggtcaacggcaagcgcgacacgctggaa
ggcctgaaggaaaacgtcatcgtcggccgtctgatcccggccggtacgggcgcctacctg
cgcagcctgcagaagatcgccaacgagcgtgacgccgagctgacgcaagcccgcgaagac
gcggtcgagccgctgccggccgatctggccctggagctggagaagtcggaaggctga

DBGET integrated database retrieval system