Brevundimonas sp. M20: FKQ52_15340
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Entry
FKQ52_15340 CDS
T10469
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
breu Brevundimonas sp. M20
Brite
KEGG Orthology (KO) [BR:
breu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
breu03016
]
FKQ52_15340 (truB)
Enzymes [BR:
breu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FKQ52_15340 (truB)
Transfer RNA biogenesis [BR:
breu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FKQ52_15340 (truB)
Prokaryotic type
FKQ52_15340 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QDH74660
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All DBs
Position
3105383..3106315
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AA seq
310 aa
AA seq
DB search
MARRKRGEIVNGWVCLDKPYEMGSTEAVTRIRRLFDAQKAGHAGTLDPLASGILPIALGE
ATKTVPFMMEAQKVYRFTLHWGVSTDSVDREGEIIGRSDVRPTVQAVKAALPAFVGEIDQ
VPPAFSAVKVDGQRAYDLAREGVKVELKARRVTIHEATVTDAPDADHIEITMRTGKGVYV
RSLARDLAAVLGAEGHVSALRREQVGPFNLQNAVTLDSLEEMVHRGAASEGLLPVATALD
DIPELAVTDQDAFSLRQGRPIVLLPRQVETLKGQLQGDARTVSVFLGQTLVALGQLRAGR
IEPDRVFNLP
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtcggaaacgcggcgagatcgtcaacggctgggtctgtctggacaagccgtac
gagatgggatcgacggaggccgtcacccgcatccgccgcctgttcgacgcccagaaggcc
gggcatgccgggacgctggacccgctggcctccggcatcctgcccatcgcgctgggagag
gcgaccaagaccgtgcccttcatgatggaggcgcagaaggtctatcgcttcaccctccac
tggggcgtctcgaccgacagcgttgaccgcgagggcgagatcatcggccgttcggacgtg
cgtccgacggtacaggcggtgaaggccgccctgcccgccttcgtcggcgagatcgatcag
gtcccgccggccttctcggccgtcaaggtggacggccagcgcgcctatgacctggcccgc
gaaggcgtgaaggtcgagctgaaggcccgccgggtgaccatccacgaggcgacggtgacc
gacgcgccggacgccgaccacatcgagatcaccatgcggaccggcaagggtgtctatgtc
cgttcgctggcgcgcgatctggccgcggtgttgggcgccgagggtcatgtgtcggccctg
cgaagagagcaggtgggtccgttcaacctgcaaaacgcggtgacgctggattctctggag
gaaatggtgcataggggcgccgcctcggaaggcttgcttcccgtcgcgaccgccctggac
gacatcccggagctggccgttacggatcaggacgccttctcgcttcggcagggacggccg
atcgttctgcttccccgacaggtcgagacactcaagggtcagctgcaaggcgacgcccgg
acggtttcggtctttctgggacagaccctcgtcgctctcggtcagttgcgggccggtcgg
attgaacccgaccgcgttttcaatctcccctga
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