Brevundimonas sp. M20: FKQ52_15350
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Entry
FKQ52_15350 CDS
T10469
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
breu Brevundimonas sp. M20
Pathway
breu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
breu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FKQ52_15350 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
breu03019
]
FKQ52_15350 (pnp)
03016 Transfer RNA biogenesis [BR:
breu03016
]
FKQ52_15350 (pnp)
Enzymes [BR:
breu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FKQ52_15350 (pnp)
Messenger RNA biogenesis [BR:
breu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FKQ52_15350 (pnp)
Transfer RNA biogenesis [BR:
breu03016
]
Prokaryotic type
tRNA degradation factors
FKQ52_15350 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
S1_RRP5
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
QDH74662
LinkDB
All DBs
Position
3106858..3109086
Genome browser
AA seq
742 aa
AA seq
DB search
MFDIKRKTIEWAGRPLTLETGRIARQADGAVLATYGETVVLATVVYGRAPKPGLDFFPLT
VNYQEKTFAAGKIPGGYFKREGRPTEKETLVSRLIDRPIRPLFVKGFKNETQVVITVLQH
DLENDPDVVGMVAASAALTISGVSFMGPIGAARVGYIDGELVLNPTIDQLPSSDLDLVVA
GTTDALMMVESEAKELSEDTFLEALMFAHRGMQPVIEAIIELAEHAAKEPFDFQAEDHSD
VVTAIQGLVGEDIKAAYTHTAKHDRHNAVGAAKKKAAEALVKTEENPDGVEPAKFATAFK
ECEAHVLRRDIIDNGHRVDGRALDKVRSIVSEVGVFPRTHGSALFTRGETQAIVVATLGT
GEDEQYIDALTGTYKEKFLLHYNFPPYSVGETGRMGGAGRREIGHGKLAWRAIRPMLPSS
DEFPYTIRLVSEITESNGSSSMATVCGSSLALMDAGVPLKKPVSGIAMGLILEPSGEFAI
LSDILGDEDHLGDMDFKVAGTRDGITSLQMDIKVAGITEEIMKKAIAQASAGRLHILDEM
DKAIDGARTELGEFAPKIETIKVPVDKIREVIGTGGKVIREIVEKTGAKINIEDDGTVKI
AASEQDKIDAAKAWISSIVSEPEVGTIYTGKVVKVVDFGAFVNFFGAKDGLVHVSQMALE
RVANPADVVSEGQEVKVKFLGLDDRGKTKLSMKVVDQATGEDLTDKINAERAERGEAPLA
DDTGGRPKREGGGGDRGRRRRD
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatatcaaacgcaagacgatcgagtgggccggccgcccgctgacgctggaaacc
ggccgcatcgcccgtcaggccgacggcgccgtgctggcgacctacggcgagaccgtggtt
ctggccaccgtcgtctacggccgcgcgccgaagccgggcctggacttcttcccgctgacc
gtcaactaccaggaaaagaccttcgccgccggcaagatcccgggcggctacttcaagcgt
gaaggccgtccgaccgagaaggagaccctggtctcccgcctgatcgaccgtccgatccgc
ccgctgttcgtcaagggcttcaagaacgagacccaggtcgtcatcaccgtgctgcagcac
gatctcgagaacgacccggacgtggtcggcatggtcgccgcctcggccgccctgaccatc
tcgggcgtttccttcatgggcccgatcggcgccgcccgcgtcggctacatcgacggtgag
ctggtcctgaacccgaccatcgaccaactgccgagctcggacctggacctggtcgtcgcc
ggcaccaccgacgccctgatgatggtcgagtcggaagccaaggaactgtcggaagacacc
ttcctggaagccctgatgttcgcccaccgcggcatgcagccggtgatcgaagccatcatc
gaactggccgagcacgccgccaaggagcccttcgacttccaggccgaagaccactcggac
gtcgtcacggcgatccagggtctggtcggcgaggacatcaaggccgcctacacccacacc
gccaagcatgaccgccacaacgccgtcggcgccgccaagaagaaggccgccgaagcgctg
gtgaagaccgaggagaacccggacggcgtcgagccggccaagttcgccaccgccttcaag
gaatgcgaagcccacgtcctgcgtcgcgacatcatcgacaacggtcaccgcgtcgacggc
cgcgccctcgacaaggtccgctcgatcgtctcggaagtcggcgtcttcccgcgcacccac
ggttcggccctgttcacccgcggtgaaacccaggccatcgtcgtcgccaccctcggcacc
ggcgaggacgagcagtacatcgacgcgctcacggggacgtacaaggagaagttcctgctt
cactacaacttccctccctactcggtcggtgagaccggtcgtatgggcggcgcgggtcgt
cgtgaaatcggtcacggcaagctggcctggcgggcgatccgcccgatgctgccgtcgtcg
gacgagttcccctacaccatccgtctggtctccgagatcaccgagtcgaacggctcgtcc
tcgatggccacggtctgcggttcgtcgctggccctgatggacgcgggcgttccgctgaag
aagcccgtctcgggcatcgccatgggcctgatcctggagccgtcgggcgagttcgccatc
ctgtcggacatcctgggtgacgaagatcacctgggcgacatggacttcaaggtcgccggc
acccgtgacggcatcacctcgctgcagatggacatcaaggtcgccggcatcaccgaagag
atcatgaagaaggccatcgcccaggcttcggccggccgccttcacatcctcgacgagatg
gacaaggccatcgacggcgcccgcaccgagctgggcgagttcgcgcccaagatcgagacc
atcaaggtcccggtcgacaagatccgtgaagtgatcggcaccggcggcaaggtgatccgc
gagatcgtcgagaagaccggcgccaagatcaacatcgaggacgacggcacggtgaagatc
gccgcctcggaacaggacaagatcgacgccgccaaggcctggatctcgtcgatcgtttcg
gagccggaagtcggcacgatctacaccggcaaggtcgtgaaggtcgtcgacttcggcgcc
ttcgtgaacttcttcggcgccaaggacggtctggtccacgtgtcgcagatggctctggag
cgcgtcgccaacccggccgacgtcgtttcggaaggccaggaggtcaaggtcaaattcctg
ggcctggacgaccgcggcaagaccaagctgtcgatgaaggtcgttgatcaggccacgggt
gaagacctgacggacaagatcaacgccgagcgcgccgagcgtggcgaagccccgctggcc
gacgacaccggcggccgtccgaagcgtgaaggcggcggcggtgaccgcggccgtcgtcgc
cgggactaa
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