Brevundimonas sp. SGAir0440: E7T10_05215
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Entry
E7T10_05215 CDS
T06410
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
brev
Brevundimonas sp. SGAir0440
Pathway
brev03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
brev00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E7T10_05215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brev03019
]
E7T10_05215
03009 Ribosome biogenesis [BR:
brev03009
]
E7T10_05215
Enzymes [BR:
brev01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
E7T10_05215
Messenger RNA biogenesis [BR:
brev03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E7T10_05215
Ribosome biogenesis [BR:
brev03009
]
Prokaryotic type
rRNA helicases
E7T10_05215
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
FhaA_N
CMS1
Motif
Other DBs
NCBI-ProteinID:
QCQ98111
UniProt:
A0A4P8Q7Y4
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All DBs
Position
1074048..1075946
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AA seq
632 aa
AA seq
DB search
MPFPAVHPALDRALINKGYAEPTPVQAAVLEAEHADRDLLVSAQTGSGKTVAFGLAAAPT
LLGDKPIFGPGGAPLCLAIAPTRELAMQVAAELQWLYADAGAKIATCVGGMDARREARAL
GFGVHIVVGTPGRLKDHIDRGNLDLSELKVAVLDEADEMLDMGFREDLEHILDQAPAERR
TLLFSATIARDIATLAKRYQKDAVRIDATDKTRQHADIEYRAYRIAPNEIEHAVVNTLRW
FEAPRAMVFCSTRDSVRHLQSSLLERGFSSVSLSGEMGQRERTDALQSLRDGRARVCVAT
DVAARGLDLPDLGLVIHAELPMNRAGLLHRSGRTGRAGKKGISVMLVPHSRRRKAERLMD
EAGIDAVWTGAPTFDEIRKADEDRLLSPSHFEAEVSDEDMVVAKRMIAERTPDEIAAALV
RLLRKEQPAPEELSDPGSDRGPAKRDRMVRNDDGTTAQPWPGERLGADDVVWFRLDVGRN
KNADPKWLIPLICRIGGISKPQIGAIRTFPEETRFEVAKTHEKTFREAVAASKDEVKITP
SEAPTPGSMKASRFAGKPREDGDRPFKKTPYKRADGGEGDARPPFKKKPWAPKNDGGANP
RSNASGDKPYAKKSFKAKPGFKKDGFKGKPKG
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgccctttcccgccgtccatcccgcgctcgaccgcgccctgatcaacaagggctacgcc
gaacccactccggtacaggccgccgtgctggaggcggagcatgcggatcgcgacctgctg
gtttcggcccagacgggttcgggcaagaccgtcgccttcggtctggccgctgcgccgacc
ctgctgggcgacaagccgatcttcggccccggcggcgcgccgctgtgcctggccatcgcg
ccgacgcgggaactggccatgcaggtcgccgccgagctgcaatggctgtacgccgacgcc
ggcgccaagatcgccacctgcgtcggcggcatggatgcgcgccgtgaagcccgcgcgctc
ggcttcggcgtccacatcgtcgtcggaacgcccggccgtctgaaggaccatatcgaccgg
ggcaatctggacctgtccgagctgaaggtcgccgtcctcgatgaggccgacgagatgctg
gacatgggcttccgcgaagacctggagcacatcctggatcaggcgccggccgaacgccgc
accctgctgttctcggcgaccatcgcgcgcgacatcgccaccctggccaaacgctatcag
aaggacgcggtccgcatcgacgcgaccgacaagacgcgccagcacgccgacatcgaatac
cgcgcctatcgcatcgcgcccaacgagatcgagcacgcggtggtcaacaccctgcgctgg
ttcgaggcgccgcgcgccatggtcttctgctcgacccgcgacagcgtgcgtcacctgcag
tcgtcgctgctggagcgcggcttctcttccgtcagtctgtcgggcgaaatgggtcagcgc
gagcgtaccgatgcgcttcagtcgctgcgtgacggccgcgcccgcgtctgcgtcgccacc
gacgtggccgcgcgcggtctggacctgccggacctgggtctggtcattcacgccgaattg
ccgatgaaccgcgccggcctgctgcaccgctcgggccgaacgggccgggcgggcaagaag
ggcatctcggtcatgctggtcccgcattcgcgtcgtcgcaaggccgagcggctgatggac
gaggccggcatcgacgccgtctggaccggcgccccgaccttcgacgaaatccgcaaggcc
gacgaggaccgtctgctgtcgccgtcgcacttcgaggccgaggtctccgacgaggacatg
gtcgtcgccaagcggatgatcgccgaacgcacgcccgacgagatcgccgccgcactggtg
cgtctgctgcgcaaggagcagccggcgccggaagaactgtccgatccgggttcggatcgc
ggtccggccaagcgcgaccgcatggtccgcaacgatgacggcacgacggcccaaccctgg
cctggcgagcgtctgggcgccgacgacgtggtctggttccgtctggacgtgggccgcaac
aagaacgccgacccgaaatggctgatcccgctgatctgccgtatcggcggcatttcaaag
cctcagattggcgccatccgcaccttccccgaagagacgcggttcgaggtcgccaagacc
cacgagaagaccttccgcgaagccgtcgccgcctccaaggacgaggtgaagatcaccccg
tcggaagccccgacgcccggctcgatgaaggccagccgcttcgccggcaagccgcgcgag
gatggcgatcgccccttcaagaagaccccctacaagcgcgccgacggcggcgagggcgac
gcccgcccgccgttcaagaagaagccctgggcgccgaagaacgatggcggcgccaacccg
cgctcgaacgcctcgggcgacaagccctatgccaagaagtccttcaaggccaagccgggc
ttcaagaaggacggcttcaagggcaagcccaagggctga
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