Brevundimonas sp. SGAir0440: E7T10_07860
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Entry
E7T10_07860 CDS
T06410
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
brev
Brevundimonas sp. SGAir0440
Brite
KEGG Orthology (KO) [BR:
brev00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
brev03016
]
E7T10_07860 (rnd)
Enzymes [BR:
brev01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
E7T10_07860 (rnd)
Transfer RNA biogenesis [BR:
brev03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
E7T10_07860 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
QCQ98590
UniProt:
A0A4P8Q957
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All DBs
Position
1592555..1593703
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AA seq
382 aa
AA seq
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MTPITTTEALADFCARVANAPFITVDTEFMRETTYWPKLCLIQAASADHAAIIDPMAEGL
DLEPFLDLLRDEKIVKVFHACRQDVEIFVRLGGMPKPMFDTQVAAMAAGFGEQVAYDSLV
RQMLRIEVDKGSRFTDWARRPLSENQLVYALGDVTHLAALYPKLRDRLQKEGRLEWVMSE
MESLTDPALYDTNPENAWKRLKPKKFSAKYLAAFKAVAVWRERAAQERDQPRGRILKDEG
IDEIAQQTPTDVEAFNRLRSVPKGFGGSRLGLELAEELKRVLADPEAFAPEMERPAHRQP
APPSVVKLLKVLLKAKSDNAGVASKLIATVSDLEKIAISDDADIDAMKGWRRQIFGEDAL
KLKRGEIALVLNGARVEVVEIE
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgatcaccaccaccgaggcgctggccgatttctgcgcccgcgtagccaacgct
cctttcatcacggtcgataccgagttcatgcgggaaacgacctattggccgaagctctgc
ctgattcaggcggcctcggccgatcacgccgccatcatcgacccgatggcggaggggctg
gatctggagccgttcctggacctgctgcgcgacgagaagatcgtgaaggtcttccacgcc
tgccgacaggacgtggaaatcttcgtgcgcctggggggcatgcccaagccgatgttcgac
acccaggtcgccgccatggccgccgggttcggcgagcaggtcgcctatgattcgctggtg
cggcagatgctgcgtatcgaggtggacaagggcagccgcttcaccgactgggcgcgccgg
ccgttgtcggagaaccagctggtctatgcgctgggcgacgtgacccaccttgcggcgctt
tatcccaagctgcgcgaccggctgcagaaggaaggccggctggagtgggtgatgtcggag
atggagagcctgaccgatccggccctctacgacaccaatcccgaaaacgcctggaagcgg
ctgaagcccaagaagttctcggccaaatatctggcggcgttcaaggccgtcgccgtctgg
cgcgagcgggcggcgcaggagcgcgaccagccgcgcggccgcattctgaaggacgagggc
atcgacgagatcgcccaacagaccccgacggatgtcgaggccttcaatcgcctgcgctcg
gtgccgaagggttttggcggttcacggctgggtctggaactggccgaggagctgaaacgg
gttctggccgatcctgaagcctttgcgcccgagatggagcgccccgcccaccgccagccg
gccccgccgtcggtcgtgaagctgttgaaggtgctgctgaaggccaagagcgacaacgcc
ggcgtggcctccaagctgatcgccaccgtgtcggacctggaaaagatcgccatcagcgac
gatgccgacatcgacgcgatgaagggctggcgccgccagatcttcggcgaggacgcgctg
aagctgaagcgcggcgagatcgcccttgtgctgaacggcgcgcgggtggaagtcgtcgag
atcgagtag
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