Brevundimonas sp. SGAir0440: E7T10_07995
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Entry
E7T10_07995 CDS
T06410
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
brev
Brevundimonas sp. SGAir0440
Pathway
brev03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
brev00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
E7T10_07995 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
brev03021
]
E7T10_07995 (rpoC)
03400 DNA repair and recombination proteins [BR:
brev03400
]
E7T10_07995 (rpoC)
Enzymes [BR:
brev01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
E7T10_07995 (rpoC)
Transcription machinery [BR:
brev03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
E7T10_07995 (rpoC)
DNA repair and recombination proteins [BR:
brev03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
E7T10_07995 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
QCQ98615
UniProt:
A0A4P8Q961
LinkDB
All DBs
Position
1622391..1626587
Genome browser
AA seq
1398 aa
AA seq
DB search
MNQEVLNIFNPVPVTPTFDQIKIALASPEKIRSWSFGEIKKPETINYRTFKPERDGLFCA
RIFGPTKDYECLCGKYKRMKYKGIICEKCGVEVTLARVRRERMGHIDLAAPVAHIWFLKS
LPSRISLMLDMALKDVERVLYFENYIVTEPGLTPLKQNQLLTEDEFYRYQEEFGDDGFTA
EIGAEAVRNLLMGIDLNAEAEKHRAELADNPSEMKAKKASKRLKLIEAFLESGNKPEWMI
LTIVPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPDIIIRNEKRM
LQESVDALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVITVG
PELKLHECGLPKKMALELFKPFIYARLDAKGLSGTVKQSKRMVEREQPAVWDILDEVIRE
HPVLLNRAPTLHRLGIQAFEPKLIEGKAIRLHPLVCTAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILSPANGKPIIVPSQDIVLGLYYLSLVKDGEPGEGKLFANIGEIDAALD
AKVVTLHTRIKARWTEQDAEGKEVTKVIDTTPGRMKLAALLPRNPNVGYRLLEKNLTKKE
IGNLIDVVYRHCGQKATVIFADQMMGLGFREAAKAGISFGKDDIVIPAKKVELVAETRTQ
VEEYEQQYADGLITRGEKYNKVVDAWSKATDRIADAMMGEIAQPRVLIEGENPDINSVFM
MANSGARGSQAQMKQLGGMRGLMAKPSGEIIETPITSNFKEGLTVLEYFNSTHGARKGLA
DTALKTANSGYLTRRLVDVAQDSIVTEQDCGSTRGITLRAVMEGGDVLVSLGQRILGRYA
AEDIKEPGTDTVLFPADTYLVEEIAEAVEAAGVQSVKVRSALTCEADAGICAHCYGRDLA
RGTNVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGTAQVAETSFMEATNAGTAKVTGPTV
VAAHGDLVAMSRNVIVTVVVDGKDRETHKAPYGARIRVKDGDEVKKNQRLAEWDPYTTPI
LTEVGGVVRFEDLVEGLSVMEETDEATGIAQRVVSDWRASPRGSDLRPAMGVTLGDAYAK
LSSGSDARYLLPVGAVLSVSNGDEVKPGEIIARVPTEGAKTRDITGGLPRVAELFEARRP
KDCAVIAEMDGRVEFGRDYKNKRRIKITPEPNADGVQGEPVEFLIPKGKHISVHDGDLIQ
KGDYIIDGNPDPHDLLRIQGVEALAEYLVNEVQEVYRLQGVPINDKHIEVIVRQMLQKVE
VLDSGETTLIRGDTVEVAEAVLENAKVEKRGGRLATTQPVLLGITKASLQTRSFISAASF
QETTRVLTDASVHGKKDMLEGLKENVIVGRLIPAGTGAYLRSLQKIANARDAELTSALEE
AIEPLPADLQLELESSES
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggaagtcctgaacatcttcaacccggtcccggtcaccccgaccttcgaccag
atcaagatcgccctggcctcgcccgagaagatccgttcgtggtcgttcggcgagatcaag
aagccggaaaccatcaactaccgcacgttcaagcccgagcgtgacggcctgttctgcgcg
cgtatctttggcccgaccaaggactacgaatgcctgtgcggcaagtacaagcgcatgaag
tacaagggcatcatctgcgagaagtgcggcgtcgaagtcaccctggcccgcgttcgccgc
gagcgcatgggtcacatcgacctggccgcgccggtcgctcacatctggttcctgaagtcg
ctgcccagccgcatctcgctgatgctggacatggcgctgaaggacgtcgagcgcgtcctg
tacttcgagaactacatcgtcaccgagccggggctgaccccgctgaagcagaaccagctg
ctgacggaagacgagttctatcgctaccaggaagagttcggcgatgacggcttcaccgcc
gaaatcggcgccgaggccgtccgcaacctgctgatgggcatcgacctgaacgcggaagcc
gaaaagcaccgcgccgagctggccgacaatccctcggaaatgaaggccaagaaggcgtcc
aagcgcctgaagctgatcgaggccttcctggaatcgggcaacaagcccgagtggatgatc
ctgacgatcgtgccggtcattccgccggaactgcgtccgctggtgccgctggacggcggt
cgttttgcgacctccgacctgaacgacctgtatcgccgcgtcatcaaccgcaacaaccgc
ctgaagcgccttatggagctgcgcgcgccggatatcatcatccgtaacgaaaagcggatg
ctgcaggagtcggtcgacgccctgttcgacaacggccgtcgcggtcgcgtgatcaccggc
gccaacaagcgtccgctgaagtcgctggccgacatgctgaagggcaagcagggtcgcttc
cgtcagaacctgctgggcaagcgcgtcgactattcgggccgttcggtcatcaccgtgggt
ccggaactgaagctgcacgagtgcggcctgcccaagaagatggcgctggagctgttcaag
ccgttcatctatgcgcgtctggacgccaagggcctgtcgggcactgtcaagcaatccaag
cgcatggtcgagcgcgagcagcccgccgtttgggacatcctggacgaggtcatccgcgag
cacccggttctgctgaaccgcgcgccgacgcttcaccgtctgggcatccaggcgttcgag
cccaagctgatcgagggcaaggccatccgcctgcacccgctggtctgcaccgccttcaac
gccgacttcgacggcgaccagatggccgttcacgtcccgctgagcctcgaggcccagctg
gaagcgcgcgtcctgatgatgtcgaccaacaacatcctgtcgcccgccaacggcaagccg
atcatcgtgccgtcgcaggacatcgtcttgggcctgtactatctgtcgctggtcaaggac
ggcgagccgggcgaaggcaagctgttcgccaacatcggcgagatcgatgcggcgctggac
gccaaggtcgtcaccttgcacacgcgcattaaggcgcgctggacggaacaggacgccgaa
ggcaaggaggtgaccaaggtcatcgacaccacgccgggtcgcatgaagctggccgccctg
ctgccgcgtaacccgaacgtcggctatcgcctgctcgagaagaacctgaccaagaaggaa
atcggcaatctgatcgacgtggtctatcgccactgcggtcagaaggcgacggtcatcttc
gccgaccagatgatgggcctgggcttccgcgaagccgccaaggccggcatttcgttcggc
aaggacgacatcgtgatcccggccaagaaggtcgagctggtcgccgagacccgcacccag
gtcgaggagtacgagcaacagtacgccgacggcctgatcacgcgcggcgagaagtacaac
aaggtggtcgacgcctggtccaaggcgacggaccggatcgccgacgccatgatgggcgag
atcgcgcaaccgcgcgtgctgatcgagggtgaaaaccccgacatcaactcggtcttcatg
atggccaactccggcgctcggggttcgcaggcgcagatgaagcaactgggcggcatgcgc
ggcctgatggccaagccgtccggcgagatcatcgagacgccgatcacctcgaacttcaag
gaaggcctgaccgtccttgaatacttcaactccacccacggcgcccgtaagggtctggcc
gacaccgcgctgaagaccgccaactcgggttatctgacccgtcgtctggtggacgtggcg
caggattccatcgtcaccgagcaggattgcggctcgacgcgcggcatcaccctgcgtgcg
gtgatggaaggcggcgacgtgctggtctcgctgggtcagcgcatcctgggtcgctatgcg
gccgaggacatcaaggagccaggcacagacaccgtcctgttccccgccgacacctatctg
gtggaagaaatcgccgaggccgtcgaggctgcgggcgtccagtcggtcaaggtccgttcg
gccctgacctgcgaggcggacgccggcatctgcgcccactgctacggccgtgacctggcg
cgcggcaccaacgtcaacatcggcgaagcggtcggcgtcatcgccgcccagtcgatcggc
gagccgggcactcagctgacgatgcggaccttccacatcggcggtacggcccaggtggcg
gaaacctccttcatggaggcgaccaacgccggtacggccaaggtcaccggcccgaccgtc
gtcgcggcccacggcgacctggtggccatgagccgtaacgtcatcgtgaccgtggtcgtg
gacggcaaggaccgcgagacgcacaaggctccttacggcgcccgcatccgcgtcaaggac
ggcgacgaggtcaagaagaaccaacgcctggcggagtgggacccctacaccaccccgatc
ctgacggaagtcggcggcgtcgtgcgcttcgaggacctggtcgaaggcctgtcggtcatg
gaagaaaccgacgaagcgacgggcatcgcccagcgcgtcgtcagcgactggcgcgccagc
ccgcgtggttcggacctgcgtccggccatgggcgtcaccctgggcgacgcctacgccaag
ctgtcgtccggttcggacgcccgctatctgctgcccgtgggcgcggttctgtccgtgtcg
aacggcgatgaggtcaagccgggcgagatcatcgcccgcgttccgaccgaaggcgccaag
acccgcgacatcaccggcggtctgccgcgcgtcgccgaactgttcgaagcgcgccgtccg
aaggactgcgcggtcatcgccgagatggatggtcgcgtcgaattcggtcgcgactacaag
aacaagcgtcgcatcaagatcacgcccgagcccaacgccgacggcgtgcagggcgaaccg
gtcgagttcctgatcccgaagggcaagcacatctccgtccacgacggcgatctgatccag
aagggcgactacatcatcgacggcaacccggatccgcacgatctgctgcgcatccagggc
gtcgaggcgctggccgagtatctggtgaacgaagtgcaggaggtctatcgactgcagggc
gtgccgatcaacgacaagcacatcgaagtcatcgtgcgtcagatgctgcagaaggtggaa
gtgctggattcgggtgaaaccaccctgatccgcggcgacaccgtcgaagtcgccgaagcc
gttctagaaaacgccaaggtcgagaagcgcggcggccgtctggccaccacccagcccgtc
ctgctgggcatcaccaaggcgtcgctgcaaacccgcagcttcatctcggcggcgtccttc
caggagaccacccgcgtcctcaccgacgcctcggtccatggcaagaaggacatgctggaa
ggcctgaaggaaaacgtcatcgtcggccgcctgatcccggccggcaccggcgcctacctg
cgcagcctgcagaagatcgccaacgcgcgtgatgcggaactgacctcggccctggaagag
gcgatcgagccgctgccggccgatctgcaactggagctggagagcagcgagagctga
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integrated database retrieval system
