Brevundimonas sp. SGAir0440: E7T10_14125
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Entry
E7T10_14125 CDS
T06410
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
brev
Brevundimonas sp. SGAir0440
Pathway
brev03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
brev00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E7T10_14125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brev03019
]
E7T10_14125
Enzymes [BR:
brev01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
E7T10_14125
Messenger RNA biogenesis [BR:
brev03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E7T10_14125
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Utp25_C
AAA_22
UTP25_NTPase-like
Motif
Other DBs
NCBI-ProteinID:
QCR00171
UniProt:
A0A4P8QD33
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All DBs
Position
2879484..2880953
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AA seq
489 aa
AA seq
DB search
MGLNKALLQALASTGYTKPTPIQEKAIPDVMAGKDLLGIAQTGTGKTAAFALPILHRLAE
NRIPPRPRTTRVLVLSPTRELATQIGDSFKAYGAHLGFRVAVIFGGVKYGAQERALQQGL
DILIAAPGRLLDHIQQKNLDLSSTEIFVLDEADQMLDLGFIKPIRQIVSKIPAKRQNLFF
SATMPGEIGKLAGELLKDPVKVQVTPQSTTVQRISQSVVYIEQGRKRALLTEMFSDPEYT
RCLVFTKTKHGADKVAAYLEAGGVEAGAIHGNKSQPQRERTLEAFKKGKLRVLVATDIAA
RGIDVDGVSHVVNFELPHVPESYVHRIGRTARAGKDGTAVSFVAGDEMKLLRDIEKVTRQ
KIPAIDRRNDKALGQLDATIMATGVGKKATLPEREGGERNEGGRGGRGRRNPHRDGVRPE
GGGQPHRQRRNRPGETPAAPRPERAYNPLAGERVPSINDNAKPAEGQMKRRPRRRPSNGG
KGYGGAAKG
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgaacaaggccctgctgcaggcgctggcctcgaccggctataccaagccgacc
ccgatccaggaaaaggccatccccgacgtcatggccggcaaggacctgttgggcatcgcc
cagaccggcaccggcaagaccgccgccttcgccctgccgatcctgcatcgcctggccgaa
aaccgcattccgccccggccgcgcacgacgcgcgtgctggtcctgagccccacgcgtgag
ctggccacccagatcggcgacagcttcaaggcctacggcgcgcacctgggcttccgggtc
gccgtgatcttcggcggcgtgaaatacggcgcccaggagcgggccctgcaacagggtctg
gacatcctgatcgccgcgcccggccgcctgctggaccacatccagcagaagaacctggac
ctgtcctcgaccgagatcttcgtgctggacgaggccgaccagatgctggacctgggcttc
atcaagccgatccgccagatcgtctccaagattccggccaagcgtcagaacctgttcttc
tcggcgactatgcccggcgagatcggcaagctggcgggcgagctgctgaaggacccggtc
aaggtccaggtcacgccgcagtctaccacggtgcagcgcatcagccagtcggtcgtctat
atcgaacagggccgcaaacgcgccctgctgaccgagatgttctcggatcccgaatacacg
cgctgcctggtcttcaccaagaccaagcacggcgccgacaaggtcgcggcctatctggaa
gccggcggcgtcgaggccggggcaatccacggcaacaagagccagccccagcgtgaacgc
accctggaagccttcaagaaaggcaagctgcgcgtcctggtcgccaccgacatcgccgcg
cgcggcatcgacgtggacggcgtctcgcacgtcgtgaacttcgaactgccgcacgtgccg
gaaagctatgtccaccgcatcggccgcaccgcgcgggcgggcaaggacggcaccgccgtc
agcttcgtcgccggcgacgagatgaagctgttgcgcgacatcgaaaaggtcacgcgccag
aagatcccggccatcgaccgccgcaacgacaaggccctgggccagctggacgccaccatc
atggccaccggcgtcggcaagaaggcgaccctgcccgagcgcgagggcggcgagcgcaac
gaaggcggacggggtggtcgcggccgtcgcaatccccaccgcgacggcgtgcgtccggaa
ggcggcggccagccgcaccgccagcgtcgcaaccgcccgggcgaaaccccggcggccccg
cgtcccgagcgcgcctacaaccccctggccggcgagcgcgtgccgtcgatcaatgacaac
gccaagccggcggaaggtcagatgaagcgccgcccgcgtcgccgcccgtcgaacggcggc
aagggctacggcggcgccgccaagggctga
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