Brevundimonas sp. MF30-B: E4M01_00325
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Entry
E4M01_00325 CDS
T06201
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
brf
Brevundimonas sp. MF30-B
Pathway
brf00300
Lysine biosynthesis
brf01100
Metabolic pathways
brf01120
Microbial metabolism in diverse environments
brf01230
Biosynthesis of amino acids
Module
brf_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
brf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
E4M01_00325 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
brf01002
]
E4M01_00325 (dapE)
Enzymes [BR:
brf01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
E4M01_00325 (dapE)
Peptidases and inhibitors [BR:
brf01002
]
Metallo peptidases
Family M20
E4M01_00325 (dapE)
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
QBX36333
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Position
69244..70413
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AA seq
389 aa
AA seq
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MSRASNPVIDPVELTRDLIRRPSVTPADAGAMDVLEEALTALGFTCRRMPFENIENLYAR
RGTASPNLCFAGHTDVVPTGPAEAWSAAPFEAEVREGVIYGRGAVDMKGGIAAWVGAVSR
ILAEGEPEGSLSFLITGDEEGPALHGTKRVVEALMAEGEVIDACIVGEPSSAQRLGDMIK
VGRRGSLNTWITVHGKQGHVAYPDRAANPAPVLARLLARLDAHTLDEGYPEFPPSNLEIT
TIDIGNPATNIIPAEARARLNIRFNPTHTGDGLIDWLNREAGEAQAASGLRIELEHLCSG
EAFLTQAGDFVGAVQTAVEQSLGVRPEASTTGGTSDARFIRALCPVLELGLVGQTMHQID
ERVPEAEVRALSETYEAVIRAVTDRLSAN
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcgcatcaaatcctgtgatcgatcctgtcgaactgacccgcgacctgatccgc
cgcccctcggtcaccccggcggacgccggggccatggatgtgctggaagaggcgctgacc
gccctgggcttcacctgccggcggatgccgttcgagaacatcgagaacctttacgctcga
cgtgggacggcctcgcccaacctctgtttcgcgggccacaccgacgtggtgccgaccggc
ccggccgaggcctggagcgcggcgccgttcgaggccgaggttcgcgagggcgtgatctac
ggacggggcgcggtggacatgaagggcggcatcgccgcctgggtcggggccgtatcgcgg
atcctggccgagggcgaacctgagggctcgctttccttcctgatcaccggcgacgaggaa
ggccccgccctgcacgggaccaagcgcgtggtcgaggccctgatggccgagggtgaggtc
atcgacgcctgcattgtcggcgaaccgtcgtcggcccagcggctgggcgacatgatcaag
gtcggccggcgcggctcgttgaacacctggatcaccgtccatggaaagcagggccatgtc
gcctatcccgaccgcgcggctaaccccgcgcccgtgctggcgcggctgttggcacggctg
gacgcgcacaccctggacgaaggctacccggagtttccgccgtcgaacctcgagatcacc
accatcgacatcggcaatccggcgaccaacatcattccggccgaggcgcgcgcgcggctg
aacatccgcttcaatcccacccacaccggcgacgggctgatcgactggctgaaccgcgag
gcgggcgaggcccaggcggcgtcgggtctgcgcatcgaactggagcacctgtgctcgggc
gaggcgttcctgacccaggccggggatttcgtgggcgcggtgcagaccgccgtggagcag
tctctgggcgtgcggcccgaggcctcgaccaccggcggaacgtccgacgcgcgcttcatc
cgcgccctgtgcccggtgctggagctgggtctggtcggccagaccatgcaccagatcgac
gagcgcgtgcccgaggctgaggtgcgcgccttgtccgagacttacgaggcggtgatccgc
gccgtgacggaccgcctgtcggccaattga
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