Brevundimonas sp. MF30-B: E4M01_02940
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Entry
E4M01_02940 CDS
T06201
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
brf
Brevundimonas sp. MF30-B
Pathway
brf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
brf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E4M01_02940 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brf03019
]
E4M01_02940 (pnp)
03016 Transfer RNA biogenesis [BR:
brf03016
]
E4M01_02940 (pnp)
Enzymes [BR:
brf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
E4M01_02940 (pnp)
Messenger RNA biogenesis [BR:
brf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
E4M01_02940 (pnp)
Transfer RNA biogenesis [BR:
brf03016
]
Prokaryotic type
tRNA degradation factors
E4M01_02940 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
PHB_acc_N
Motif
Other DBs
NCBI-ProteinID:
QBX36798
LinkDB
All DBs
Position
complement(581507..583741)
Genome browser
AA seq
744 aa
AA seq
DB search
MFDIKRKTIDWAGRPLTLETGRIARQADGAVLATYGETVVLATVVYGRAPKPGLDFFPLT
VNYQEKTFAAGKIPGGYFKREGRPTEKETLVSRLIDRPIRPLFVKGFKNETQVVVTVLQH
DMENDPDIVGLVAASAALTISGVPFMGPIGAARVGYIDGELVLNPTLEQMPTSDLDLVVA
GTQDALMMVESEAKELSEDTFLDALMFAHRGMQPVIDAIIELAEHAAKEPFDFQAEDHSD
VVASIQNLVGEDIKAAYTHAGKYERRTGVDVAKKKAAEALVKTDENPDGVEPAKFGAAFK
ECEAHVLRRDIIDNGHRVDGRALDKVRDIVSEVGVFPRTHGSALFTRGETQAIVVATLGT
GEDEQYVDALSGTYKEKFLLHYNFPPYSVGETGRMGGAGRREIGHGKLAWRAIRPMLPSS
EDFPYTIRLVSEITESNGSSSMATVCGSSLALMDAGVPLKKPVSGIAMGLILEPSGEFAI
LSDILGDEDHLGDMDFKVAGTRDGITSLQMDIKVAGITEEIMKKAIAQASAGRLHILDEM
DKAIDGARTELGEFAPKIESIKVPTDKIRDIIGTGGKIIREIVEKTGAKINIEDDGTVKI
AASEQEKIDAAKAWISSIVSEPEPGAIYTGKVVKVVDFGAFVNFFGAKDGLVHVSQISLE
RVANPADVLSEGQEVKVKFLGMDDRGKTKLSMKVVDQETGEDITDKINAERAERGEAPLS
EDTGGRPKRDGDRNGGDRGRRRRD
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatatcaaacgcaagacgatcgactgggccggccggccgctgacgctggaaacc
ggccgcatcgcccgtcaggccgacggcgccgtgctggcgacctatggcgagaccgtggtt
ctggccaccgtcgtctacggacgcgcgcccaagcccggcctggatttcttcccgctgacc
gtcaactaccaggaaaagaccttcgccgccggcaagatcccgggcggctatttcaagcgt
gaaggccgtccgaccgagaaggagacgctggtctcgcgcctgatcgaccgtccgatccgt
ccgctgttcgtcaagggcttcaagaacgagacccaggtcgtcgtcaccgtgctgcagcac
gacatggaaaacgatccggacatcgtcggcctggtggccgcctcggccgccctgacgatc
tcgggcgtgcccttcatgggcccgatcggcgccgcgcgcgtcggctacatcgacggcgag
ctggtgctgaacccgacgctggagcagatgccgacctcggacctggatctggtggtcgcc
ggcacccaggacgccctgatgatggtcgagtccgaggccaaggaactgtcggaagacacc
ttcctggacgctctgatgttcgcccaccgcggcatgcagccggtgatcgacgcgatcatc
gaactggccgagcacgccgccaaggagcccttcgacttccaggccgaggatcactccgac
gtcgtcgcctcgatccagaacctggtcggcgaggacatcaaggccgcctacacccacgcc
ggcaagtacgagcgccgcaccggcgtcgacgtggccaagaagaaggccgccgaagccctg
gtgaagaccgacgagaacccggacggcgtcgagccggccaagttcggcgcggctttcaag
gaatgcgaagcccacgtcctgcgtcgcgacatcatcgacaacggccaccgcgtcgacggc
cgcgccctggacaaggtccgggacatcgtctcggaagtcggcgtcttcccgcgcacccac
ggctcggccctgttcacccgcggtgaaacgcaagccatcgtggtcgccaccctgggcacc
ggcgaagacgaacagtacgtcgacgccctgtcggggacgtacaaagagaagttcctgctg
cactataacttccctccctactcggtcggcgagaccggtcggatgggcggcgcgggtcgt
cgggaaatcggtcacggcaagctggcctggcgcgccatccgtccgatgctgccgtcgtcg
gaagacttcccctacaccatccgtctggtgtcggagatcaccgagtccaacggctcgtcc
tcgatggccacggtctgcggttcgtcgctggcgctgatggatgcgggcgtgccgctgaag
aagcccgtctcgggcatcgccatgggcctgatcctggagccgtcgggcgagttcgccatc
ctgtcggacatcctgggtgacgaagatcacctgggcgacatggacttcaaggtcgccggc
acgcgtgacggcatcacctcgctgcagatggacatcaaggtcgccggcatcaccgaagag
atcatgaagaaggcgatcgcccaggcttcggccggccgtcttcacattctcgacgagatg
gacaaggccatcgacggcgcccgcaccgagctgggcgagttcgcgcccaagatcgagtcg
atcaaggttccgaccgacaagatccgtgacatcatcggcaccggcggcaagatcatccgc
gagatcgtcgaaaagaccggcgccaagatcaacatcgaggacgacggcacggtgaagatc
gccgcctcggaacaggaaaagatcgacgccgccaaggcctggatctcgtccatcgtctcc
gagcccgagccgggcgccatctacaccggcaaggtcgtgaaggtcgtcgacttcggcgcc
ttcgtgaacttcttcggcgccaaggacggcttggtccacgtcagccagatctcgctggag
cgcgtcgccaacccggctgacgtcctgtcggaaggccaggaggtcaaggtcaagttcctg
ggcatggacgatcgcggcaagacgaagctgtcgatgaaggtcgtggatcaggaaaccggt
gaggacatcaccgacaagatcaacgccgagcgcgccgaacgcggcgaggccccgctgtcg
gaagacaccggcggtcgtcccaagcgggacggcgaccgcaacggcggcgatcgcggccgt
cgtcgtcgcgactga
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