Brevundimonas sp. MF30-B: E4M01_02950
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Entry
E4M01_02950 CDS
T06201
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
brf
Brevundimonas sp. MF30-B
Brite
KEGG Orthology (KO) [BR:
brf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
brf03016
]
E4M01_02950 (truB)
Enzymes [BR:
brf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
E4M01_02950 (truB)
Transfer RNA biogenesis [BR:
brf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
E4M01_02950 (truB)
Prokaryotic type
E4M01_02950 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
QBX36800
LinkDB
All DBs
Position
complement(584261..585193)
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AA seq
310 aa
AA seq
DB search
MARRKRGDVVDGWVCLDKPYGMGSTEAVTKVRRLFNAQKAGHAGTLDPLADGILPIALGE
ATKTVPFMMEAQKVYRFTIQWGVSTDSLDREGEITGRSDVRPSVEAVKAALPDFVGEIDQ
VPPAFSAIKVNGERAYDLARDGVEVELASRRVTIHEAAVTDAPDADHLEITMRTGKGVYV
RSLARDLARMLGAEGHVSALRRERVGPFSTQNAVSLDFLSDLAHKGAASEGLLPVSTALD
DIPELAVTDQDALSLRQGRPIVLLPRQVETLKDQLNAGSRTVSAFAGGTLVALCSMRAGR
LEPDRVFNLP
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtcgcaagcgcggcgacgtcgtcgacgggtgggtctgtctggacaagccctac
ggcatgggatcgaccgaggcggtcaccaaggtgcgccgcctgttcaacgcccagaaggcg
ggtcacgccggcacgctggatccgctggcggacggcatcctgccgatcgcgctgggcgaa
gccacaaagaccgtgcccttcatgatggaggcgcagaaggtctatcgcttcaccatccag
tggggcgtctcgaccgacagcctggatcgcgagggtgagatcaccggccgctccgacgtt
cggccctcggtcgaggcggtgaaggcggcgctgccggacttcgtgggtgagatcgatcag
gttccgccggccttctcggccatcaaggtcaatggcgagcgcgcctatgacctggcgcgc
gacggggtcgaggtcgagctggcttcgcgccgcgtgaccatccacgaagccgcggtgacc
gacgcgccggacgccgaccacctcgagatcaccatgcgcaccggcaagggcgtctacgtc
cgctcgctggcgcgcgacctggcccggatgctgggcgcggaggggcacgtttcggccctg
cggcgcgagcgcgtggggccgttctcgacccagaatgcggtgtcgctggattttctgtcc
gatctggcgcataagggcgccgcctcggagggcctgctgcccgtctcgaccgctctggac
gacatcccggagctggccgtcacggaccaggacgccctctcgctgaggcagggacggccg
atcgttctgctcccccgacaggtcgaaacgctcaaggaccagctcaatgcgggttctcgg
acggtttcggcgttcgcgggcggaaccctggtcgctctctgttcgatgcgggccggtcga
ttagaacccgaccgcgttttcaacctcccatga
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