Brevundimonas sp. MF30-B: E4M01_04470
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Entry
E4M01_04470 CDS
T06201
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
brf
Brevundimonas sp. MF30-B
Pathway
brf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
brf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
E4M01_04470 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brf03400
]
E4M01_04470 (uvrB)
DNA repair and recombination proteins [BR:
brf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E4M01_04470 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
E4M01_04470 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Kinesin
Flavi_DEAD
UB2H
SWI2_SNF2
ACP_syn_III_C
AAA_16
eIF3_p135
UvrD-helicase
Microtub_bd
DUF87
Uds1
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
QBX37084
LinkDB
All DBs
Position
875476..877845
Genome browser
AA seq
789 aa
AA seq
DB search
MNRSSAPKGSAPRLTKPVHVPGKVAEAPAAFLRDDDGNSAKAAPKTPHMPMFAPVTGPRL
TPEEAPGAPTDWVPHRPSRALDKKRQKFRLQTTYTPAGDQPAAIAELVEQAKAGERDQVL
LGVTGSGKTFTMAKVIEQTQRPALILAPNKTLAAQLYSEFKSFFPDNAVEYFVSYYDYYQ
PEAYVPRTDTYIEKDSSINEQIDRMRHSATRAILERDDVIVVASVSCIYGIGSVETYTAM
TFTLKAGDQIDEAKLRADLIALQYKRNDMTFERGMFRKRGDTLEIFPVHLEDRAWRISLF
GDEIEAIQEFDPLTGKKTADLDEVTVYAASHYVTPRPTLNQAMTGIKAELKETLDWMVEN
GKLLEAQRLEQRTRFDLEMMEATGSCAGIENYSRWLTGRAPGEPPPTFFEYIPDNALLFV
DESHVTVGQIGGMYRGDYRRKSTLAEYGFRLPSCIDNRPLKFDEWNAMRPQTVHVSATPG
KWEMEQTGGVFVEQVIRPTGLIDPPVEVRPVSGKTRNQVDDVIDEVKATTARGYRSLVTT
LTKKMAEDLTEYMHEQGVRVRYMHSDVDTLERIEILRDLRLGTFDCLIGINLLREGLDIP
ECGLVAILDADKEGFLRSETSLVQTIGRAARNVDGRVILYADRMTGSMERAMGETERRRE
KQQAYNAEHGITPESVRRDIKEILESPYESRELDRLTRPGVAEAAKPFVGSNFQATLRDL
EAKMREAASNLEFEQAARLRDEIKKMKLLDLEFANEALTASGEEVDKSAPKRWRAEAAAE
KAERFRKGR
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgttcttccgctccgaagggctccgcgccccgtctgaccaagcccgtgcacgtg
cccggcaaggtggccgaggctccggccgcctttctgcgcgacgacgatggcaacagcgcc
aaggccgcacccaagacgccgcacatgccgatgttcgcgcccgtcaccggtccgcggctg
acgcccgaggaggcgcccggcgcgccgacggactgggtgccgcaccgcccctcgcgcgcc
ctggacaagaagcgccagaagttccgcctgcagacgacctacacccccgcgggcgaccag
cccgccgccatcgccgaactggtcgaacaggccaaggcgggcgagcgcgaccaggtgctg
ctgggcgtcaccggctcgggcaagaccttcaccatggccaaggtgatcgaacagacccag
cgccccgccctgatcctggcgccgaacaagacgctggcggctcaactatactcggagttc
aagagtttctttccagacaatgcggttgaatactttgtaagctattacgactattatcaa
cctgaagcatatgttccccgaactgacacttacatcgaaaaggatagctcgataaacgag
cagatcgaccggatgcgccactcggcgacgcgggctattctggagcgggacgacgttatc
gtcgtggcctcggtcagctgcatctacggcatcgggtcggtcgagacctatacggcgatg
acgttcacgctgaaggcgggcgatcagatcgacgaggcgaagctgcgggccgacctgatc
gcgctgcagtacaagcgcaacgacatgacgttcgagcgcggcatgttcaggaagcgcggc
gacacgctggagatcttccccgtccacctggaggaccgggcctggcgcatcagcctgttc
ggcgacgagatcgaggcgatccaggagttcgaccccctgaccggcaagaagaccgccgat
ctggacgaggtcaccgtctacgccgccagccactatgtcacgccgcgcccgacgctgaac
caggccatgaccggcatcaaggccgagctgaaggagacgctcgactggatggtcgagaac
ggcaagctcctggaagcccagcgcctggagcagcgcacgcgcttcgatctggagatgatg
gaggccacgggctcgtgcgccggcatcgagaactacagccgctggctgaccggccgcgcg
cccggcgagccgccgcccaccttcttcgaatacatccccgacaacgccctgctgttcgtc
gacgagagccacgtcaccgtgggccagatcggcggcatgtaccggggcgactaccgccgc
aagtcgacgctggcggagtacggcttccgcctgcccagctgtatcgacaaccgcccgctc
aagttcgacgagtggaacgccatgcggccccagacggtccacgtctcggccacgcccggc
aagtgggagatggaacagaccggcggcgtcttcgtcgaacaggtcatccgccccaccggc
ctcatcgacccgccggtcgaggtgcgccccgtctcgggcaagacccgcaaccaggtcgac
gacgtcatcgacgaggtgaaggccacgaccgcgcgcggctaccgctccctggtcaccacc
ctgaccaagaagatggccgaggacctgaccgaatacatgcacgaacagggggtgcgcgtc
cgctacatgcactctgacgtcgacacgctggagcggatcgagatcctgcgcgacctgcgc
ctggggaccttcgactgcctgatcggcatcaacctgctgcgcgaggggctggacatcccc
gagtgcggcctggtcgccattctggacgccgataaggagggcttcctgcgctccgagacc
tcgctggtccagactatcggccgtgctgcgcgcaacgtcgacggccgcgtcatcctgtac
gccgaccgcatgaccggctcgatggagcgcgccatgggcgagaccgagcgccggcgcgag
aagcagcaggcctacaacgccgaacacggcattacgcccgaaagcgtgcgccgcgacatc
aaggagatcctggaaagcccctacgaaagccgcgagctggaccgcctgacccgccccggc
gtcgccgaggccgccaaacccttcgtcggctccaacttccaggccaccctcagggacctg
gaggccaagatgcgcgaggccgcgtccaacctggagttcgaacaggccgcccgcctgcgc
gacgagatcaagaagatgaagctgctcgacctggagttcgccaacgaggccctcaccgcc
tcaggcgaagaggtcgacaagtccgcgccgaagcggtggcgcgcggaagcggcggccgag
aaggcggagcggttcaggaaggggcggtag
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